| ID | SAVERM_4143
| Type | CDS
|
| From | 5083047
| nt length | 780
|
| To | 5083826
| aa length | 259
|
| Gene |
| pI | 9.43
|
| Definition | putative ABC transporter permease protein
| M.W (Da) | 27331
|
| Note | PF01061: ABC-2 type transporter
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4074 putative integral membrane protein | 296 | 4.0e-102
|
| sgr | SGR_3865 putative ABC transporter permease protein | 235 | 3.0e-78
|
| sam | SAM23877_3605 Integral membrane protein | 329 | 2.0e-115
|
| scab | SCAB47761 putative ABC transporter permease protein | 321 | 3.0e-112
|
| sace | SACE_0790 ABC transporter membrane protein | 83 | 1.0e-19
|
| cglu | gi|19552173 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 98 | 2.0e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC2_membrane | 1 | ABC-2 type transporter | 13-220 | 67.5 | 9.9e-19
|
| ABC2_membrane_3 | 1 | ABC-2 family transporter protein | 55-246 | 45.8 | 4e-12
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5012 | Seems to have no N-terminal signal seq.
|