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IDSAVERM_4173 TypeCDS
From5122539 nt length669
To5123207 aa length222
Gene pI10.02
Definitionputative membrane protein M.W (Da)23378
NotePF03729: Short repeat of unknown function (DUF308) AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4045 putative integral membrane protein2395.0e-81
samSAM23877_3637 conserved membrane protein of unknown function2503.0e-85
nfarnfa31070 hypothetical protein2221.8e-59
mtubgi|15608762 Probable conserved membrane protein [Mycobacterium tuberculosis H37Rv]1821.6e-47

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF3083Short repeat of unknown function (DUF308)53-123, 110-179, 166-21479.41.7e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_129798662.1 HdeD family acid-resistance protein [Streptomyces sp. F001] ... 6661.3e-85
WP_067377030.1 HdeD family acid-resistance protein [Streptomyces olivochrom... 6632.8e-85
WP_189776343.1 HdeD family acid-resistance protein [Streptomyces tauricus] ... 6624.4e-85
WP_210881333.1 HdeD family acid-resistance protein [Streptomyces sp. BH-SS-... 6625.0e-85
WP_075031393.1 HdeD family acid-resistance protein [Streptomyces mirabilis]... 6606.0e-85
WP_190173668.1 MULTISPECIES: HdeD family acid-resistance protein [Streptomy... 6607.7e-85
WP_095853810.1 MULTISPECIES: HdeD family acid-resistance protein [unclassif... 6571.7e-84
WP_168493259.1 MULTISPECIES: HdeD family acid-resistance protein [Streptomy... 6554.5e-84
WP_107020541.1 HdeD family acid-resistance protein [Streptomyces dioscori] ... 6539.4e-84
QIY96897.1 HdeD family acid-resistance protein [Streptomyces sp. S1D4-11] 6521.1e-83

PSORT result

LocalizationCertaintyPSORT said
membrane0.5607 Seems to have no N-terminal signal seq.