| ID | SAVERM_4178
| Type | CDS
|
| From | 5127511
| nt length | 636
|
| To | 5126876
| aa length | 211
|
| Gene | uraP
| pI | 4.69
|
| Definition | putative uracil phosphoribosyltransferase
| M.W (Da) | 22815
|
| Note | upp, PF00156: Phosphoribosyl transferase domain
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4041 putative transferase | 391 | 2.0e-141
|
| sgr | SGR_3535 putative uracil phosphoribosyltransferase | 385 | 7.0e-139
|
| sam | SAM23877_3642 Uracil phosphoribosyltransferase | 394 | 1.0e-142
|
| scab | SCAB47351 putative uracil phosphoribosyltransferase | 386 | 3.0e-139
|
| sace | SACE_6559 uracil phosphoribosyltransferase | 199 | 5.0e-66
|
| nfar | nfa9590 upp uracil phosphoribosyltransferase | 221 | 2.8e-59
|
| mtub | gi|15610445 uracil phosphoribosyltransferase [Mycobacterium tuberculosis H37Rv] | 214 | 3.5e-57
|
| cglu | gi|19551914 COG0035:Uracil phosphoribosyltransferase [Corynebacterium glutamicum] | 214 | 1.9e-57
|
| bsub | BG10945 upp, ipc-35d; uracil phosphoribosyltransferase [EC:2.4.2.9] | 211 | 3.4e-56
|
| ecoli | gi|16130423 uracil phosphoribosyltransferase [Escherichia coli K12] | 185 | 2.2e-48
|
| paer | PA4646 [gene=upp] [prot=uracil phosphoribosyltransferase] [comment=PA4646] | 197 | 4.5e-52
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UPRTase | 1 | Uracil phosphoribosyltransferase | 5-209 | 215.3 | 5.7e-64
|
| Pribosyltran | 1 | Phosphoribosyl transferase domain | 70-167 | 43.8 | 1.6e-11
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_143643421.1 | uracil phosphoribosyltransferase [Streptomyces sp. IB201691-...
| 974 | 6.5e-133 |
| WP_055618267.1 | MULTISPECIES: uracil phosphoribosyltransferase [Streptomyces...
| 971 | 1.8e-132 |
| GHH57389.1 | uracil phosphoribosyltransferase [Streptomyces umbrinus]
| 970 | 2.5e-132 |
| WP_081218219.1 | uracil phosphoribosyltransferase [Streptomyces sp. M41(2017)...
| 968 | 4.5e-132 |
| WP_141313287.1 | MULTISPECIES: uracil phosphoribosyltransferase [Streptomyces...
| 968 | 5.9e-132 |
| WP_099505416.1 | MULTISPECIES: uracil phosphoribosyltransferase [Streptomyces...
| 967 | 6.4e-132 |
| WP_054235115.1 | MULTISPECIES: uracil phosphoribosyltransferase [Streptomyces...
| 967 | 8.0e-132 |
| WP_164372620.1 | uracil phosphoribosyltransferase [Streptomyces sp. SID14446]...
| 967 | 8.0e-132 |
| GHB55548.1 | uracil phosphoribosyltransferase [Streptomyces umbrinus]
| 968 | 8.4e-132 |
| WP_200396881.1 | uracil phosphoribosyltransferase [Streptomyces sp. ZYC-3] >g...
| 967 | 8.7e-132 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1044 | Seems to have no N-terminal signal seq.
|