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IDSAVERM_4194 TypeCDS
From5144689 nt length1497
To5143193 aa length498
Gene pI8.21
Definitionputative transmembrane efflux protein M.W (Da)50256
Notehomolog of virginiamycin S resistance gene (varS), PF07690: Major Facilitator Superfamily AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4024 putative integral membrane protein7340.0e+00
sgrSGR_3561 putative permease of the major facilitator superfamily6270.0e+00
samSAM23877_3660 putative transmembrane efflux protein7230.0e+00
scabSCAB47211 putative transmembrane efflux protein7710.0e+00
saceSACE_5813 integral membrane efflux protein3028.0e-98

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MFS_11Major Facilitator Superfamily23-415176.94.8e-52

Sugar_tr1Sugar (and other) transporter42-19630.02.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_143655306.1 MFS transporter [Streptomyces sp. S1A1-7] >gb 15700.0e+00
WP_099925548.1 MFS transporter [Streptomyces sp. GbtcB7] 15650.0e+00
WP_097289065.1 MFS transporter [Streptomyces sp. OK228] >emb 15620.0e+00
WP_143608600.1 MULTISPECIES: MFS transporter [unclassified Streptomyces] >g... 15620.0e+00
WP_075031506.1 MFS transporter [Streptomyces mirabilis] >emb 15580.0e+00
WP_181650791.1 MFS transporter [Streptomyces sp. WAC00263] >lcl 15580.0e+00
WP_143627195.1 MULTISPECIES: MFS transporter [unclassified Streptomyces] >g... 15520.0e+00
WP_143602236.1 MULTISPECIES: MFS transporter [unclassified Streptomyces] >g... 15490.0e+00
PBC97849.1 EmrB/QacA subfamily drug resistance transporter [Streptomyces sp.... 15440.0e+00
WP_095857952.1 MFS transporter [Streptomyces sp. Ag82_O1-15] 15440.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.4630 Seems to have an uncleavable N-term signal seq