| ID | SAVERM_4224
| Type | CDS
|
| From | 5179544
| nt length | 810
|
| To | 5180353
| aa length | 269
|
| Gene | glpQ2
| pI | 7.23
|
| Definition | putative glycerophosphoryl diester phosphodiesterase
| M.W (Da) | 29841
|
| Note | F03009: Glycerophosphoryl diester phosphodiesterase family
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of lipids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3976 putative phosphodiesterase | 449 | 3.0e-162
|
| sgr | SGR_3615 putative phosphodiesterase | 412 | 1.0e-147
|
| sam | SAM23877_3687 putative glycerophosphoryl diester phosphodiesterase 1 | 445 | 1.0e-160
|
| scab | SCAB46791 putative glycerophosphoryl diester phosphodiesterase | 469 | 2.0e-170
|
| sace | SACE_0126 glycerophosphoryl diester phosphodiesterase | 243 | 2.0e-81
|
| nfar | nfa1250 glycerophosphoryl diester phosphodiesterase | 227 | 9.5e-61
|
| mtub | gi|15610978 PROBABLE GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE GLPQ1 (GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE) [Mycobacterium tuberculosis H37Rv] | 230 | 6.6e-62
|
| cglu | gi|19554095 COG0584:Glycerophosphoryl diester phosphodiesterase [Corynebacterium glutamicum] | 112 | 1.4e-26
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GDPD | 1 | Glycerophosphoryl diester phosphodiesterase family | 14-261 | 159.6 | 1.1e-46
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498222.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. SI...
| 1333 | 0.0e+00 |
| OPG07168.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. GKU 895...
| 1244 | 3.7e-172 |
| WP_126273007.1 | glycerophosphodiester phosphodiesterase [Streptomyces aquilu...
| 1241 | 1.1e-171 |
|
| 1236 | 5.5e-171 |
|
| 1235 | 8.1e-171 |
| WP_097266103.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. TL...
| 1235 | 1.0e-170 |
| WP_059194442.1 | glycerophosphodiester phosphodiesterase [Streptomyces antibi...
| 1234 | 1.2e-170 |
| WP_053746068.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. NR...
| 1233 | 1.6e-170 |
| NNN32837.1 | glycerophosphodiester phosphodiesterase [Streptomyces sp. S3(2020...
| 1233 | 1.9e-170 |
| WP_041819665.1 | glycerophosphodiester phosphodiesterase [Streptomyces davaon...
| 1232 | 2.6e-170 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2687 | Seems to have no N-terminal signal seq.
|