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IDSAVERM_4259 TypeCDS
From5224786 nt length1005
To5223782 aa length334
GenecydB1 pI8.98
Definitionputative cytochrome bd-I oxidase subunit II cytochrome bd complex) M.W (Da)36978
NotePF02322: Cytochrome oxidase subunit II AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categorymembrane bioenergetics

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3946 putative cytochrome oxidase subunit II5430.0e+00
sgrSGR_3645 putative cytochrome D ubiquinol oxidase subunit II5560.0e+00
samSAM23877_3718 Cytochrome bd ubiquinol oxidase subunit 25400.0e+00
scabSCAB46411 putative cytochrome bd-I oxidase subunit II cytochrome bd complex)5140.0e+00
saceSACE_0143 cytochrome d ubiquinol oxidase subunit II2915.0e-98
nfarnfa5860 cytochrome D ubiquinol oxidase subunit II3584.7e-100
mtubgi|15608760 Probable integral membrane cytochrome D ubiquinol oxidase (subunit II) cydB (Cytochrome BD-I oxidase subunit II) [Mycobacterium tuberculosis H37Rv]3175.5e-88
cglugi|19552374 COG1294:Cytochrome bd-type quinol oxidase, subunit 2 [Corynebacterium glutamicum]3021.3e-83
bsubBG11926 cydB, yxkL; cytochrome bd ubiquinol oxidase subunit II [EC:1.10.3.-]3068.5e-85
ecoligi|16128709 cytochrome d terminal oxidase polypeptide subunit II [Escherichia coli K12]2431.3e-65
paerPA3929 [gene=cioB] [prot=cyanide insensitive terminal oxidase] [comment=PA3929]1741.3e-44

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Cyt_bd_oxida_II1Cytochrome bd terminal oxidase subunit II3-320390.26e-117

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030609031.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces fulv... 12091.0e-164
QIY97006.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces sp. S1D4-... 12081.7e-164
WP_125188425.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces sp. ... 12072.2e-164
WP_020119544.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces canu... 12062.7e-164
WP_190174473.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces mira... 12054.1e-164
WP_164432954.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces sp. ... 12055.2e-164
WP_190176238.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces naga... 12038.0e-164
WP_161300243.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces sp. ... 12038.7e-164
WP_168493493.1 MULTISPECIES: cytochrome d ubiquinol oxidase subunit II [Str... 12039.8e-164
WP_018566269.1 MULTISPECIES: cytochrome d ubiquinol oxidase subunit II [unc... 12021.1e-163

PSORT result

LocalizationCertaintyPSORT said
membrane0.5713 Seems to have an uncleavable N-term signal seq