| ID | SAVERM_4280
| Type | CDS
|
| From | 5247343
| nt length | 1209
|
| To | 5246135
| aa length | 402
|
| Gene |
| pI | 10.59
|
| Definition | putative transmembrane efflux protein
| M.W (Da) | 40714
|
| Note | similar to cmlR, PF07690: Major Facilitator Superfamily
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3915 putative transmembrane efflux protein | 608 | 0.0e+00
|
| sgr | SGR_3664 putative permease of the major facilitator superfamily | 556 | 0.0e+00
|
| sam | SAM23877_3740 Inner membrane transport protein YdhP | 653 | 0.0e+00
|
| scab | SCAB46201 putative transmembrane efflux protein | 619 | 0.0e+00
|
| sace | SACE_1907 probable sugar efflux transporter, MFS superfamily | 506 | 1.0e-180
|
| nfar | nfa21150 transporter | 417 | 1.1e-117
|
| mtub | gi|15607332 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 134 | 1.4e-32
|
| cglu | gi|19551900 COG2814:Arabinose efflux permease [Corynebacterium glutamicum] | 281 | 5.0e-77
|
| bsub | BG13825 ytbD; similar to antibiotic resistance protein | 305 | 2.4e-84
|
| ecoli | gi|16129615 putative transport protein [Escherichia coli K12] | 324 | 5.6e-90
|
| paer | PA4355 [gene=PA4355] [prot=probable MFS transporter] [comment=PA4355] | 368 | 4.6e-103
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MFS_1 | 1 | Major Facilitator Superfamily | 8-328 | 149.0 | 1.5e-43
|
| Sugar_tr | 1 | Sugar (and other) transporter | 40-181 | 40.5 | 1.4e-10
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4885 | Seems to have a cleavable N-term signal seq.
|