| ID | SAVERM_4286
| Type | CDS
|
| From | 5253904
| nt length | 447
|
| To | 5253458
| aa length | 148
|
| Gene | rplI
| pI | 10.31
|
| Definition | putative ribosomal protein L9
| M.W (Da) | 15996
|
| Note | PF03948: Ribosomal protein L9, C-terminal domain
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3909 putative 50S ribosomal protein L9 | 283 | 1.0e-100
|
| sgr | SGR_3671 putative 50S ribosomal protein L9 | 251 | 3.0e-88
|
| sam | SAM23877_3747 50S ribosomal protein L9 | 280 | 2.0e-99
|
| scab | SCAB46131 putative ribosomal protein L9 | 281 | 5.0e-100
|
| sace | SACE_7348 50S ribosomal protein L9 | 154 | 1.0e-49
|
| nfar | nfa55750 rplI ribosomal protein L9 | 154 | 3.1e-39
|
| mtub | gi|15607198 50S ribosomal protein L9 [Mycobacterium tuberculosis H37Rv] | 145 | 1.1e-36
|
| cglu | gi|19554174 COG0359:Ribosomal protein L9 [Corynebacterium glutamicum] | 134 | 1.4e-33
|
| bsub | BG10009 rplI; 50S ribosomal protein L9 | 103 | 5.6e-24
|
| ecoli | gi|16132025 50S ribosomal protein L9 [Escherichia coli K12] | 96 | 5.9e-22
|
| paer | PA4932 [gene=rplI] [prot=50S ribosomal protein L9] [comment=PA4932] | 78 | 1.7e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_L9_C | 1 | Ribosomal protein L9, C-terminal domain | 63-147 | 98.5 | 2e-28
|
| Ribosomal_L9_N | 1 | Ribosomal protein L9, N-terminal domain | 1-45 | 75.1 | 2.2e-21
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_033321283.1 | MULTISPECIES: 50S ribosomal protein L9 [Streptomyces] >gb
| 751 | 4.9e-101 |
| WP_055610620.1 | MULTISPECIES: 50S ribosomal protein L9 [Streptomyces] >gb
| 749 | 1.1e-100 |
| WP_165342781.1 | 50S ribosomal protein L9 [Streptomyces ureilyticus] >gb
| 747 | 1.9e-100 |
| WP_119106127.1 | 50S ribosomal protein L9 [Streptomyces sporangiiformans] >lc...
| 747 | 1.9e-100 |
| WP_217457141.1 | 50S ribosomal protein L9 [Streptomyces sp. BV286] >lcl
| 745 | 4.0e-100 |
| WP_069759556.1 | 50S ribosomal protein L9 [Streptomyces sp. LUP47B]
| 745 | 4.3e-100 |
| WP_006381650.1 | MULTISPECIES: 50S ribosomal protein L9 [Streptomyces] >gb
| 744 | 5.9e-100 |
| WP_054236454.1 | MULTISPECIES: 50S ribosomal protein L9 [Streptomyces] >gb
| 744 | 7.2e-100 |
| WP_081218312.1 | MULTISPECIES: 50S ribosomal protein L9 [unclassified Strepto...
| 744 | 7.5e-100 |
| WP_020134131.1 | MULTISPECIES: 50S ribosomal protein L9 [Streptomyces] >gb
| 743 | 7.7e-100 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1363 | Seems to have no N-terminal signal seq.
|