| ID | SAVERM_4293
| Type | CDS
|
| From | 5259906
| nt length | 1518
|
| To | 5258389
| aa length | 505
|
| Gene |
| pI | 7.52
|
| Definition | putative transmembrane protein
| M.W (Da) | 55301
|
| Note | PF05007: Mannosyltransferase (PIG-M)
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3902 putative transmembrane protein | 785 | 0.0e+00
|
| sgr | SGR_3678 putative transmembrane protein | 675 | 0.0e+00
|
| sam | SAM23877_3754 putative integral membrane protein | 761 | 0.0e+00
|
| scab | SCAB46051 putative transmembrane protein | 870 | 0.0e+00
|
| sace | SACE_7355 possible membrane protein | 269 | 1.0e-84
|
| nfar | nfa55580 membrane protein | 290 | 2.0e-79
|
| mtub | gi|15607193 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 263 | 2.6e-71
|
| cglu | gi|19554179 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 239 | 2.2e-64
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GT87 | 1 | Glycosyltransferase family 87 | 125-365 | 45.0 | 9.8e-12
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_099502019.1 | MULTISPECIES: glycosyltransferase 87 family protein [Strepto...
| 2287 | 0.0e+00 |
| WP_189877909.1 | glycosyltransferase 87 family protein [Streptomyces bluensis...
| 2262 | 0.0e+00 |
| WP_055493967.1 | glycosyltransferase 87 family protein [Streptomyces sp. TP-A...
| 2261 | 0.0e+00 |
| WP_152174095.1 | glycosyltransferase 87 family protein [Streptomyces phaeoliv...
| 2259 | 0.0e+00 |
| GGZ84175.1 | membrane protein [Streptomyces bluensis]
| 2249 | 0.0e+00 |
| WP_230212293.1 | glycosyltransferase 87 family protein [Streptomyces sp. MNU7...
| 2245 | 0.0e+00 |
| WP_086748637.1 | glycosyltransferase 87 family protein [Streptomyces scabiei]
| 2244 | 0.0e+00 |
| EMF52600.1 | hypothetical protein SBD_5676 [Streptomyces bottropensis ATCC 254...
| 2240 | 0.0e+00 |
| WP_037689628.1 | glycosyltransferase 87 family protein [Streptomyces scabiei]...
| 2239 | 0.0e+00 |
| WP_141595331.1 | glycosyltransferase 87 family protein [Streptomyces ipomoeae...
| 2239 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3888 | Seems to have no N-terminal signal seq.
|