| ID | SAVERM_4311
| Type | CDS
|
| From | 5283366
| nt length | 513
|
| To | 5282854
| aa length | 170
|
| Gene | jag
| pI | 4.28
|
| Definition | putative Jag-like protein
| M.W (Da) | 18281
|
| Note | PF01424: R3H domain
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | sporulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3884 hypothetical protein | 302 | 2.0e-107
|
| sgr | SGR_3695 putative Jag-like protein | 288 | 3.0e-102
|
| sam | SAM23877_3774 Jag | 300 | 7.0e-107
|
| scab | SCAB45871 putative Jag-like protein | 295 | 8.0e-105
|
| sace | SACE_7393 single-stranded nucleic acid binding R3H | 150 | 1.0e-47
|
| nfar | nfa56690 hypothetical protein | 200 | 6.2e-53
|
| mtub | gi|15611056 HYPOTHETICAL PROTEIN SIMILAR TO JAG PROTEIN [Mycobacterium tuberculosis H37Rv] | 183 | 6.2e-48
|
| bsub | BG10061 jag; SpoIIIJ-associated protein | 74 | 3.5e-15
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| R3H | 1 | R3H domain | 111-167 | 60.6 | 9.6e-17
|
| KH_4 | 1 | KH domain | 27-97 | 32.3 | 6e-08
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498241.1 | KH domain-containing protein [Streptomyces sp. SID5469]
| 665 | 1.9e-87 |
| WP_128377525.1 | single-stranded DNA-binding protein [Streptomyces cavernae]
| 655 | 1.1e-85 |
| WP_055700788.1 | MULTISPECIES: single-stranded DNA-binding protein [Streptomy...
| 654 | 1.6e-85 |
|
| 653 | 2.6e-85 |
| WP_053745998.1 | KH domain-containing protein [Streptomyces sp. NRRL WC-3618]
| 653 | 2.9e-85 |
| WP_059194365.1 | MULTISPECIES: single-stranded DNA-binding protein [Streptomy...
| 652 | 3.5e-85 |
| WP_006381195.1 | MULTISPECIES: R3H domain protein [Streptomyces] >gb
| 652 | 3.6e-85 |
| WP_062145553.1 | single-stranded DNA-binding protein [Streptomyces curacoi] >...
| 651 | 4.2e-85 |
| WP_095935442.1 | single-stranded DNA-binding protein [Streptomyces sp. Tue602...
| 651 | 4.7e-85 |
| WP_189888121.1 | single-stranded DNA-binding protein [Streptomyces canarius] ...
| 651 | 5.3e-85 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.5046 | Seems to have no N-terminal signal seq.
|