| ID | SAVERM_4313
| Type | CDS
|
| From | 5285025
| nt length | 354
|
| To | 5284672
| aa length | 117
|
| Gene |
| pI | 10.28
|
| Definition | hypothetical protein
| M.W (Da) | 13035
|
| Note | PF01809: Domain of unknown function DUF37
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3882 hypothetical protein | 200 | 8.0e-69
|
| sgr | SGR_3697 conserved hypothetical protein | 190 | 6.0e-65
|
| sam | SAM23877_3776 putative membrane protein insertion efficiency factor | 201 | 4.0e-69
|
| scab | SCAB45851 hypothetical protein | 225 | 8.0e-79
|
| sace | SACE_7395 hypothetical protein | 80 | 9.0e-22
|
| nfar | nfa56710 hypothetical protein | 68 | 1.1e-13
|
| mtub | gi|15611058 hypothetical protein Rv3922c [Mycobacterium tuberculosis H37Rv] | 60 | 2.3e-11
|
| bsub | BG13865 ytjA; hypothetical protein | 84 | 1.7e-18
|
| paer | PA2045 [gene=PA2045] [prot=conserved hypothetical protein] [comment=PA2045] | 93 | 4.1e-21
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Haemolytic | 1 | Haemolytic domain | 5-68 | 95.8 | 9.5e-28
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_093907647.1 | membrane protein insertion efficiency factor YidD [Streptomy...
| 595 | 3.6e-78 |
| WP_232027856.1 | membrane protein insertion efficiency factor YidD [Streptomy...
| 592 | 9.7e-78 |
| WP_107904969.1 | MULTISPECIES: membrane protein insertion efficiency factor Y...
| 591 | 1.5e-77 |
| WP_030947151.1 | MULTISPECIES: membrane protein insertion efficiency factor Y...
| 590 | 2.1e-77 |
| WP_190071021.1 | membrane protein insertion efficiency factor YidD [Streptomy...
| 589 | 2.4e-77 |
| WP_030665858.1 | membrane protein insertion efficiency factor YidD [Streptomy...
| 589 | 2.7e-77 |
| WP_067436151.1 | membrane protein insertion efficiency factor YidD [Streptomy...
| 587 | 5.0e-77 |
| WP_171142191.1 | membrane protein insertion efficiency factor YidD [Streptomy...
| 587 | 5.4e-77 |
| WP_164433042.1 | membrane protein insertion efficiency factor YidD [Streptomy...
| 587 | 5.7e-77 |
| WP_071366668.1 | membrane protein insertion efficiency factor YidD [Streptomy...
| 586 | 9.1e-77 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0902 | Seems to have no N-terminal signal seq.
|