| ID | SAVERM_4320
| Type | CDS
|
| From | 5292430
| nt length | 546
|
| To | 5292975
| aa length | 181
|
| Gene |
| pI | 10.43
|
| Definition | hypothetical protein
| M.W (Da) | 19347
|
| Note | PF05258: Protein of unknown function (DUF721)
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3875 hypothetical protein | 236 | 4.0e-81
|
| sgr | SGR_3704 conserved hypothetical protein | 254 | 2.0e-88
|
| sam | SAM23877_3783 hypothetical protein | 239 | 4.0e-82
|
| scab | SCAB45781 hypothetical protein | 259 | 2.0e-90
|
| sace | SACE_0006 hypothetical protein | 107 | 1.0e-30
|
| nfar | nfa40 hypothetical protein | 143 | 1.0e-35
|
| mtub | gi|15607146 hypothetical protein Rv0004 [Mycobacterium tuberculosis H37Rv] | 121 | 3.2e-29
|
| cglu | gi|19551254 conserved hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 88 | 1.2e-19
|
| paer | PA0079 [gene=PA0079] [prot=hypothetical protein] [comment=PA0079] | 35 | 2.3e-03
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF721 | 1 | Protein of unknown function (DUF721) | 67-155 | 88.9 | 2e-25
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1941 | Seems to have no N-terminal signal seq.
|