-- | --

IDSAVERM_4327 TypeCDS
From5304722 nt length549
To5304174 aa length182
Gene pI6.81
Definitionputative DNA-binding protein M.W (Da)19320
NotePF01381: Helix-turn-helix AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3859 putative DNA-binding protein3032.0e-107
sgrSGR_3713 putative DNA-binding protein2974.0e-105
samSAM23877_3796 putative DNA-binding protein3304.0e-118
scabSCAB45671 putative DNA-binding protein3383.0e-121
saceSACE_5917 hypothetical protein686.0e-16
bsubBG11843 plsX, ylpD; fatty acid/phospholipid synthesis protein plsX homolog337.7e-03

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_141570439.1 helix-turn-helix domain-containing protein [Streptomyces ipo... 7793.6e-104
WP_009343277.1 helix-turn-helix domain-containing protein [Streptomyces ipo... 7742.4e-103
WP_099921700.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7732.6e-103
WP_168529064.1 DNA-binding protein [Streptomyces sp. RPA4-2] >gb 7733.3e-103
WP_190192968.1 DNA-binding protein [Streptomyces minutiscleroticus] >dbj 7716.2e-103
WP_152865352.1 DNA-binding protein [Streptomyces acidicola] >gb 7709.4e-103
WP_186285472.1 DNA-binding protein [Streptomyces sp. PSKA01] >lcl 7691.2e-102
WP_062721195.1 MULTISPECIES: hypothetical protein [Streptomyces] >gb 7691.5e-102
WP_190203079.1 DNA-binding protein [Streptomyces fumanus] >dbj 7681.7e-102
WP_134038227.1 DNA-binding protein [Streptomyces bluensis] >dbj 7682.0e-102

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2918 Seems to have no N-terminal signal seq.