| ID | SAVERM_4329
| Type | CDS
|
| From | 5306491
| nt length | 561
|
| To | 5307051
| aa length | 186
|
| Gene | ppiA
| pI | 6.98
|
| Definition | putative peptidyl-prolyl cis-trans isomerase
| M.W (Da) | 20306
|
| Note | PF00160: Cyclophilin type peptidyl-prolyl cis-trans isomerase
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3856 putative peptidyl-prolyl cis-trans isomerase | 321 | 1.0e-114
|
| sgr | SGR_3716 putative peptidyl-prolyl cis-trans isomerase | 301 | 8.0e-107
|
| sam | SAM23877_3800 peptidyl-prolyl cis-trans isomerase B | 314 | 6.0e-112
|
| scab | SCAB45651 putative peptidyl-prolyl cis-trans isomerase | 327 | 4.0e-117
|
| sace | SACE_0034 putative peptidyl-prolyl cis-trans isomerase | 214 | 1.0e-72
|
| nfar | nfa38520 peptidyl-prolyl cis-trans isomerase | 101 | 4.6e-23
|
| mtub | gi|15607151 PROBABLE IRON-REGULATED PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A PPIA (PPIase A) (ROTAMASE A) [Mycobacterium tuberculosis H37Rv] | 213 | 8.4e-57
|
| cglu | gi|19551284 COG0652:Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Corynebacterium glutamicum] | 207 | 3.2e-55
|
| bsub | BG10512 ppiB, cypBS; peptidyl-prolyl isomerase [EC:5.2.1.8] | 91 | 2.5e-20
|
| ecoli | gi|16128509 peptidyl-prolyl cis-trans isomerase B (rotamase B) [Escherichia coli K12] | 70 | 5.1e-14
|
| paer | PA3227 [gene=ppiA] [prot=peptidyl-prolyl cis-trans isomerase A] [comment=PA3227] | 62 | 3.2e-11
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pro_isomerase | 1 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 7-170 | 149.4 | 9.1e-44
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498246.1 | peptidylprolyl isomerase [Streptomyces sp. SID5469]
| 871 | 3.7e-118 |
|
| 798 | 5.3e-107 |
| WP_189149493.1 | peptidylprolyl isomerase [Streptomyces lacrimifluminis] >dbj...
| 797 | 6.6e-107 |
| WP_053745983.1 | peptidylprolyl isomerase [Streptomyces sp. NRRL WC-3618]
| 795 | 1.2e-106 |
| WP_134038233.1 | peptidylprolyl isomerase [Streptomyces bluensis] >dbj
| 791 | 6.3e-106 |
| WP_189869539.1 | peptidylprolyl isomerase [Streptomyces viridiviolaceus] >dbj...
| 789 | 1.2e-105 |
| WP_019073556.1 | peptidylprolyl isomerase [Streptomyces hokutonensis]
| 787 | 2.0e-105 |
|
| 787 | 2.1e-105 |
| WP_093627921.1 | peptidylprolyl isomerase [Streptomyces sp. 3213.3] >emb
| 785 | 3.6e-105 |
| MPY59726.1 | peptidylprolyl isomerase [Streptomyces spongiae]
| 786 | 3.7e-105 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2491 | Seems to have no N-terminal signal seq.
|