| ID | SAVERM_4379
| Type | CDS
|
| From | 5360819
| nt length | 831
|
| To | 5359989
| aa length | 276
|
| Gene | dacD
| pI | 10.5
|
| Definition | putative D-alanyl-D-alanine carboxypeptidase
| M.W (Da) | 29052
|
| Note | PF00768: D-alanyl-D-alanine carboxypeptidase
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | cell wall
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3811 putative D-alanyl-D-alanine carboxypeptidase | 402 | 4.0e-143
|
| sgr | SGR_3768 putative D-alanyl-D-alanine carboxypeptidase | 414 | 7.0e-148
|
| sam | SAM23877_3846 D-alanyl-D-alanine carboxypeptidase | 412 | 5.0e-146
|
| scab | SCAB45141 putative D-alanyl-D-alanine carboxypeptidase | 386 | 5.0e-137
|
| bsub | BG10295 dacF; penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) [EC:3.4.16.4] | 114 | 4.8e-27
|
| ecoli | gi|16128807 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6 [Escherichia coli K12] | 102 | 2.8e-23
|
| paer | PA3999 [gene=dacC] [prot=D-ala-D-ala-carboxypeptidase] [comment=PA3999] | 110 | 1.1e-25
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Peptidase_S11 | 1 | D-alanyl-D-alanine carboxypeptidase | 13-255 | 146.7 | 7.1e-43
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_234307332.1 | MULTISPECIES: serine hydrolase [unclassified Streptomyces]
| 1211 | 2.4e-166 |
| OIJ91886.1 | D-alanyl-D-alanine carboxypeptidase [Streptomyces colonosanans]
| 1208 | 4.2e-166 |
| WP_177198715.1 | D-alanyl-D-alanine carboxypeptidase [Streptomyces colonosana...
| 1207 | 9.9e-166 |
| WP_161242106.1 | D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SID288...
| 1204 | 1.7e-165 |
| WP_190057055.1 | serine hydrolase [Streptomyces echinoruber] >dbj
| 1202 | 3.7e-165 |
|
| 1201 | 3.9e-165 |
| WP_043442161.1 | D-alanyl-D-alanine carboxypeptidase [Streptomyces nodosus] >...
| 1201 | 5.1e-165 |
| WP_093591251.1 | MULTISPECIES: D-alanyl-D-alanine carboxypeptidase [Streptomy...
| 1189 | 3.0e-163 |
| M... |
| 1189 | 4.0e-163 |
| GHE55664.1 | D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoaurantia...
| 1186 | 5.0e-163 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0441 | Seems to have no N-terminal signal seq.
|