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IDSAVERM_4399 TypeCDS
From5381111 nt length849
To5381959 aa length282
Gene pI9.56
Definitionputative DNA-binding protein M.W (Da)31361
NotePF01381: Helix-turn-helix AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_5234 DNA-binding protein2321.0e-76

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-6339.64.5e-10

HTH_31Helix-turn-helix18-6124.51.9e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498257.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12176.8e-168
WP_055615614.1 helix-turn-helix transcriptional regulator [Streptomyces pha... 11484.1e-157
WP_200397135.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 11406.8e-156
WP_134038444.1 helix-turn-helix transcriptional regulator [Streptomyces blu... 10349.8e-140
WP_030665570.1 helix-turn-helix transcriptional regulator [Streptomyces cel... 10312.7e-139
10174.4e-137
10149.2e-137
WP_220136437.1 helix-turn-helix domain-containing protein [Streptomyces him... 10135.3e-136
GHE55948.1 transcriptional regulator [Streptomyces griseoaurantiacus] 10095.8e-136
WP_006138781.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 10096.1e-136

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2741 Seems to have no N-terminal signal seq.