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IDSAVERM_4421 TypeCDS
From5406164 nt length1344
To5407507 aa length447
Gene pI5.95
Definitionputative regulatory protein M.W (Da)48015
NotePF07721: Tetratricopeptide repeat AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3782 putative regulatory protein6690.0e+00
samSAM23877_3878 Regulatory protein6470.0e+00
scabSCAB44651 putative regulatory protein6510.0e+00
bsubBG11466 rapG, yycM; response regulator aspartate phosphatase381.0e-03

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain10-6839.64.7e-10

HTH_191Helix-turn-helix domain11-7033.23.6e-08

HTH_31Helix-turn-helix15-6725.69e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
QIY97175.1 helix-turn-helix transcriptional regulator [Streptomyces sp. S1D4... 14380.0e+00
WP_081218423.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14250.0e+00
WP_164372779.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14170.0e+00
WP_055617147.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14080.0e+00
WP_190230725.1 helix-turn-helix domain-containing protein [Streptomyces umb... 14070.0e+00
WP_143641459.1 transcriptional regulator [Streptomyces sp. IB201691-2A2] >l... 14030.0e+00
WP_200397171.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14020.0e+00
WP_151483226.1 transcriptional regulator [Streptomyces albicerus] 14000.0e+00
WP_190037965.1 helix-turn-helix domain-containing protein [Streptomyces fru... 13960.0e+00
WP_055519060.1 MULTISPECIES: transcriptional regulator [Streptomyces aurant... 13950.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4394 Seems to have no N-terminal signal seq.