-- | --

IDSAVERM_4474 TypeCDS
From5464970 nt length1446
To5463525 aa length481
Gene pI4.44
Definitionputative integrin-like protein M.W (Da)47771
NotePF01839: FG-GAP repeat AseI frg.L
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
ecoligi|16129469 hypothetical protein b1510 [Escherichia coli K12]371.7e-03

*ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP6FG-GAP repeat33-64, 97-134, 159-180, 265-303, 336-375, 410-437158.82e-47

VCBS2Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella35-116, 105-17889.31.6e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237519510.1 FG-GAP-like repeat-containing protein [Streptomyces sp. HUCO... 13830.0e+00
WP_150951635.1 FG-GAP-like repeat-containing protein [Streptomyces luteolif... 13800.0e+00
MXM64894.1 hypothetical protein [Streptomyces sp. HUCO-GS316] 13800.0e+00
WP_094215946.1 FG-GAP-like repeat-containing protein [Streptomyces diastato... 13470.0e+00
WP_097253405.1 VCBS repeat-containing protein [Streptomyces sp. Ag109_G2-15... 13442.1e-180
WP_145879241.1 VCBS repeat-containing protein [Streptomyces sp. BK340] >lcl... 13216.1e-177
QTD99806.1 FG-GAP repeat protein [Streptomyces cyanogenus] 13024.2e-174
WP_208036699.1 integrin alpha [Streptomyces cyanogenus] 13014.5e-174
WP_225832373.1 VCBS repeat-containing protein [Streptomyces sp. NK08204] 12921.4e-172
WP_208877844.1 integrin alpha [Streptomyces sp. PBH53] 12539.5e-167

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.