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IDSAVERM_4475 TypeCDS
From5466422 nt length1374
To5465049 aa length457
Gene pI4.1
Definitionputative integrin-like protein M.W (Da)45004
NotePF01839: FG-GAP repeat AseI frg.L
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP4FG-GAP repeat32-66, 97-134, 160-192, 325-357163.47.4e-49

VCBS2Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella105-178, 328-40680.11.2e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_119100675.1 FG-GAP-like repeat-containing protein [Streptomyces sporangi... 15760.0e+00
WP_152788934.1 FG-GAP-like repeat-containing protein [Streptomyces phyllant... 13900.0e+00
WP_189188771.1 VCBS repeat-containing protein [Streptomyces albiflavescens]... 12011.2e-159
WP_062146017.1 integrin alpha [Streptomyces curacoi] >gb 10491.4e-136
WP_003999370.1 integrin alpha [Streptomyces viridochromogenes] >gb 10394.2e-135
WP_215158000.1 MULTISPECIES: integrin alpha [unclassified Streptomyces] >lc... 10325.6e-134
WP_062715653.1 integrin alpha [Streptomyces regalis] >gb 10203.2e-132
WP_234350874.1 integrin alpha [Streptomyces sp. JHA19] 10196.8e-132
WP_093908757.1 integrin alpha [Streptomyces sp. cf386] >emb 9943.5e-128
WP_095751454.1 VCBS repeat-containing protein [Streptomyces sp. SA15] >gb 9796.0e-126

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.