-- | --

IDSAVERM_4477 TypeCDS
From5469623 nt length1482
To5468142 aa length493
Gene pI3.92
Definitionputative integrin-like protein M.W (Da)48995
NotePF01839: FG-GAP repeat AseI frg.L
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB42591 putative integrin-like protein5540.0e+00

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP3FG-GAP repeat167-207, 353-391, 424-455129.43.1e-38

VCBS1Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella111-18577.29.9e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_099504885.1 MULTISPECIES: FG-GAP and VCBS repeat-containing protein [Str... 16560.0e+00
WP_151470089.1 VCBS repeat-containing protein [Streptomyces triticiradicis]... 16390.0e+00
WP_067033229.1 FG-GAP and VCBS repeat-containing protein [Streptomyces dysi... 16120.0e+00
WP_028799249.1 VCBS repeat-containing protein [Streptomyces sp. 142MFCol3.1... 16060.0e+00
WP_103550089.1 VCBS repeat-containing protein [Streptomyces populi] >gb 16050.0e+00
WP_031482877.1 VCBS repeat-containing protein [Streptomyces bicolor] 15710.0e+00
WP_164372811.1 FG-GAP and VCBS repeat-containing protein [Streptomyces sp. ... 15680.0e+00
WP_048584175.1 VCBS repeat-containing protein [Streptomyces viridochromogen... 15520.0e+00
WP_095935590.1 FG-GAP and VCBS repeat-containing protein [Streptomyces sp. ... 15500.0e+00
WP_081218457.1 FG-GAP and VCBS repeat-containing protein [Streptomyces sp. ... 15370.0e+00

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.