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IDSAVERM_4478 TypeCDS
From5471394 nt length1446
To5469949 aa length481
Gene pI3.97
Definitionputative integrin-like protein M.W (Da)46796
NotePF01839: FG-GAP repeat AseI frg.L
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB3701 putative integrin-like protein2881.0e-92

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP4FG-GAP repeat37-67, 99-138, 266-284, 346-383124.21.3e-36

VCBS1Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella37-11875.43.6e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498270.1 FG-GAP-like repeat-containing protein [Streptomyces sp. SID5... 19970.0e+00
WP_042162306.1 FG-GAP and VCBS repeat-containing protein [Streptomyces lydi... 8644.3e-108
GAO12913.1 hypothetical protein TPA0598_13_00970 [Streptomyces lydicamycini... 8618.5e-108
WP_136739044.1 FG-GAP and VCBS repeat-containing protein [Streptomyces pini... 8427.9e-105
KUJ67170.1 hypothetical protein ACZ90_30460 [Streptomyces albus subsp. albus... 8052.3e-99
WP_161624882.1 FG-GAP and VCBS repeat-containing protein [Streptomyces spec... 7801.9e-95
QDQ12732.1 VCBS repeat-containing protein [Streptomyces spectabilis] 7794.5e-95
WP_076972013.1 FG-GAP-like repeat-containing protein [Streptomyces sparsoge... 7768.9e-95
WP_093799320.1 FG-GAP and VCBS repeat-containing protein [Streptomyces sp. ... 7722.6e-94
WP_135332816.1 FG-GAP-like repeat-containing protein [Streptomyces sp. MZ04... 7445.5e-90

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.