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IDSAVERM_4488 TypeCDS
From5483746 nt length1137
To5484882 aa length378
Gene pI5.13
Definitionputative simple sugar ABC transporter substrate-binding protein M.W (Da)39881
NoteTat substrate, PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family AseI frg.L
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3667 putative secreted solute-binding protein5230.0e+00
samSAM23877_3950 Secreted solute-binding protein5310.0e+00
scabSCAB42381 putative ABC transporter substrate-binding protein4694.0e-167

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_41Periplasmic binding protein domain54-313201.41.8e-59

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_103837854.1 substrate-binding domain-containing protein [Streptomyces sp... 13890.0e+00
WP_200422234.1 substrate-binding domain-containing protein [Streptomyces sp... 13780.0e+00
WP_229703410.1 substrate-binding domain-containing protein [Streptomyces al... 13490.0e+00
WP_079167909.1 substrate-binding domain-containing protein [Streptomyces co... 13440.0e+00
OIK01854.1 ABC transporter substrate-binding protein [Streptomyces colonosan... 13430.0e+00
WP_054231332.1 substrate-binding domain-containing protein [Streptomyces sp... 13260.0e+00
WP_082416916.1 MULTISPECIES: substrate-binding domain-containing protein [u... 13240.0e+00
WP_168501188.1 MULTISPECIES: substrate-binding domain-containing protein [S... 13230.0e+00
WP_099504892.1 MULTISPECIES: substrate-binding domain-containing protein [S... 13211.2e-180
QIZ01805.1 sugar ABC transporter substrate-binding protein [Streptomyces sp.... 13192.5e-180

PSORT result

LocalizationCertaintyPSORT said
membrane0.1192 Seems to have no N-terminal signal seq.