| ID | SAVERM_4524
| Type | CDS
|
| From | 5526702
| nt length | 1590
|
| To | 5528291
| aa length | 529
|
| Gene |
| pI | 9.09
|
| Definition | putative transmembrane efflux protein
| M.W (Da) | 53721
|
| Note | PF07690: Major Facilitator Superfamily
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3648 putative transmembrane efflux protein | 647 | 0.0e+00
|
| sgr | SGR_3416 putative permease of the major facilitator superfamily | 607 | 0.0e+00
|
| sam | SAM23877_3970 putative sugar transporter | 662 | 0.0e+00
|
| scab | SCAB42151 putative transmembrane efflux protein | 682 | 0.0e+00
|
| sace | SACE_3524 drug resistance transporter, EmrB/QacA family | 375 | 8.0e-126
|
| nfar | nfa56350 transporter | 478 | 5.5e-136
|
| mtub | gi|15610375 PROBABLE CONSERVED TRANSMEMBRANE TRANSPORT PROTEIN [Mycobacterium tuberculosis H37Rv] | 254 | 9.9e-69
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MFS_1 | 1 | Major Facilitator Superfamily | 26-416 | 188.9 | 1.1e-55
|
| Sugar_tr | 1 | Sugar (and other) transporter | 32-198 | 34.3 | 1.1e-08
|
| MFS_3 | 1 | Transmembrane secretion effector | 69-185 | 31.8 | 4.6e-08
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3866 | Seems to have no N-terminal signal seq.
|