| ID | SAVERM_4540
| Type | CDS
|
| From | 5546452
| nt length | 1605
|
| To | 5544848
| aa length | 534
|
| Gene |
| pI | 9.65
|
| Definition | putative ABC transporter permease protein
| M.W (Da) | 54866
|
| Note | PF04172: LrgB-like family
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3634 putative ABC transporter membrane-spanning protein | 769 | 0.0e+00
|
| sgr | SGR_6698 putative ABC transporter permease protein | 286 | 2.0e-90
|
| sam | SAM23877_3983 TnrB3 protein | 258 | 5.0e-80
|
| scab | SCAB42021 putative ABC transporter permease protein | 749 | 0.0e+00
|
| sace | SACE_2702 putative exporter of polyketide antibiotics-like | 105 | 1.0e-24
|
| nfar | nfa24760 ABC transporter | 442 | 4.4e-125
|
| mtub | gi|15608357 PROBABLE TETRONASIN-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 384 | 6.4e-108
|
| cglu | gi|19554230 COG3559:Putative exporter of polyketide antibiotics [Corynebacterium glutamicum] | 107 | 1.1e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
no hits.
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4418 | Seems to have no N-terminal signal seq.
|