| ID | SAVERM_4541
| Type | CDS
|
| From | 5547363
| nt length | 915
|
| To | 5546449
| aa length | 304
|
| Gene |
| pI | 6.3
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 33447
|
| Note | PF00005: ABC transporter
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3633 putative ABC transporter ATP-binding protein | 536 | 0.0e+00
|
| sgr | SGR_6697 putative ABC transporter ATP-binding protein | 404 | 2.0e-143
|
| sam | SAM23877_3984 ABC transporter, ATP-binding protein | 392 | 1.0e-138
|
| scab | SCAB42011 putative ABC transporter ATP-binding protein | 516 | 0.0e+00
|
| sace | SACE_2701 ABC transporter related | 262 | 5.0e-88
|
| nfar | nfa24770 ABC transporter ATP-binding protein | 417 | 7.6e-118
|
| mtub | gi|15608358 PROBABLE TETRONASIN-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 399 | 1.7e-112
|
| cglu | gi|19554229 COG1131:ABC-type multidrug transport system, ATPase component [Corynebacterium glutamicum] | 264 | 4.5e-72
|
| paer | PA3394 [gene=nosF] [prot=NosF protein] [comment=PA3394] | 178 | 4.8e-46
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 23-162 | 88.6 | 4.6e-25
|
| AAA_21 | 1 | AAA domain, putative AbiEii toxin, Type IV TA system | 134-192 | 49.2 | 6e-13
|
| DUF4162 | 1 | Domain of unknown function (DUF4162) | 215-292 | 29.0 | 1.2e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_115504541.1 | ABC transporter ATP-binding protein [Streptomyces sp. M7] >g...
| 1367 | 0.0e+00 |
| WP_210982075.1 | ABC transporter ATP-binding protein [Streptomyces sp. RK62] ...
| 1366 | 0.0e+00 |
| WP_235073983.1 | ABC transporter ATP-binding protein [Streptomyces sp. FB2] >...
| 1366 | 0.0e+00 |
| QWA23448.1 | ABC transporter ATP-binding protein [Streptomyces sp. JCM17656]
| 1365 | 0.0e+00 |
| WP_055621245.1 | ABC transporter ATP-binding protein [Streptomyces sp. JHA19]
| 1362 | 0.0e+00 |
| WP_125527154.1 | ABC transporter ATP-binding protein [Streptomyces sp. WAC 05...
| 1361 | 0.0e+00 |
| WP_126903194.1 | ABC transporter ATP-binding protein [Streptomyces sp. WAC 01...
| 1360 | 0.0e+00 |
| WP_108707951.1 | ABC transporter ATP-binding protein [Streptomyces nigra] >gb...
| 1357 | 0.0e+00 |
| WP_095751393.1 | ABC transporter ATP-binding protein [Streptomyces sp. SA15] ...
| 1342 | 0.0e+00 |
| WP_214332249.1 | ABC transporter ATP-binding protein [Streptomyces sp. Tu102]...
| 1339 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1871 | Seems to have no N-terminal signal seq.
|