| ID | SAVERM_4584
| Type | CDS
|
| From | 5599696
| nt length | 390
|
| To | 5600085
| aa length | 129
|
| Gene | wblA
| pI | 4.44
|
| Definition | putative WhiB-family transcriptional regulator; putative role in cell cycle control
| M.W (Da) | 14257
|
| Note | PF02467: Transcription factor WhiB
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3579 putative WhiB-family transcriptional regulator | 195 | 1.0e-66
|
| sgr | SGR_3340 putative WhiB-family transcriptional regulator | 216 | 8.0e-75
|
| sam | SAM23877_4083 Transcriptional regulator WhiB | 194 | 3.0e-66
|
| scab | SCAB41391 putative WhiB-family transcriptional regulator; putative role in cell cycle control | 196 | 7.0e-67
|
| sace | SACE_0315 transcriptional regulator | 88 | 5.0e-25
|
| nfar | nfa3400 transcriptional regulator | 114 | 2.1e-27
|
| mtub | gi|57117144 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB4 [Mycobacterium tuberculosis H37Rv] | 119 | 5.0e-29
|
| cglu | gi|19551530 putative regulatory protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 115 | 5.3e-28
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Whib | 1 | Transcription factor WhiB | 24-86 | 86.9 | 9.1e-25
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| MPY476... |
| 598 | 2.9e-78 |
| NG... |
| 596 | 5.8e-78 |
| MPY62498.1 | WhiB family transcriptional regulator [Streptomyces spongiae]
| 594 | 1.3e-77 |
| AVH57390.1 | WhiB family transcriptional regulator [Streptomyces dengpaensis] ...
| 591 | 3.0e-77 |
| GGX74548.1 | transcriptional regulator WhiB [Streptomyces minutiscleroticus]
| 591 | 3.4e-77 |
| GGK90678.1 | transcriptional regulator WhiB [Streptomyces flaveus]
| 591 | 3.6e-77 |
| NEA64344.1 | WhiB family transcriptional regulator [Streptomyces sp. SID12488]...
| 591 | 3.6e-77 |
| GGZ13686.1 | transcriptional regulator WhiB [Streptomyces poonensis]
| 590 | 5.0e-77 |
| GHK04368.1 | transcriptional regulator WhiB [Streptomyces sp. Y2F8-2]
| 590 | 5.1e-77 |
| NEC77142.1 | WhiB family transcriptional regulator [Streptomyces rochei] >gb
| 589 | 6.1e-77 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | Seems to have no N-terminal signal seq.
|