| ID | SAVERM_4587
| Type | CDS
|
| From | 5602654
| nt length | 162
|
| To | 5602815
| aa length | 53
|
| Gene |
| pI | 4.84
|
| Definition | hypothetical protein
| M.W (Da) | 6120
|
| Note |
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3576 hypothetical protein | 109 | 9.0e-35
|
| sgr | SGR_3337 conserved hypothetical protein | 105 | 2.0e-33
|
| sam | SAM23877_4086 hypothetical protein | 109 | 9.0e-35
|
| scab | SCAB41361 hypothetical protein | 102 | 7.0e-32
|
| sace | SACE_0319 hypothetical protein | 65 | 1.0e-17
|
| nfar | nfa3430 hypothetical protein | 83 | 2.1e-18
|
| mtub | gi|57117143 hypothetical protein Rv3678A [Mycobacterium tuberculosis H37Rv] | 80 | 2.6e-17
|
| cglu | gi|19551531 conserved hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 91 | 5.3e-21
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF4177 | 1 | Domain of unknown function (DUF4177) | 4-50 | 28.6 | 1.2e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| GHB90817.1 | hypothetical protein GCM10010332_14800 [Streptomyces albogriseol...
| 280 | 1.1e-31 |
| GHG18345.1 | hypothetical protein GCM10018777_35510 [Streptomyces viridodiast...
| 280 | 1.3e-31 |
| GGQ01747.1 | hypothetical protein GCM10010233_17410 [Streptomyces gancidicus]...
| 278 | 1.4e-31 |
| GHF14864.1 | hypothetical protein GCM10018789_51280 [Streptomyces werraensis]
| 278 | 1.6e-31 |
| GHA31045.1 | hypothetical protein GCM10010391_13440 [Streptomyces anthocyanic...
| 278 | 2.7e-31 |
| AIV35083.1 | hypothetical protein NI25_17485 [Streptomyces sp. CCM_MD2014]
| 281 | 2.9e-31 |
| BDD73051.1 | hypothetical protein JCM4020_36710 [Streptomyces coelicolor] >db...
| 277 | 2.9e-31 |
| GGR55377.1 | hypothetical protein GCM10010220_01370 [Streptomyces parvulus]
| 276 | 3.3e-31 |
| GGT62005.1 | hypothetical protein GCM10010243_46220 [Streptomyces matensis]
| 276 | 3.3e-31 |
| GHE33801.1 | hypothetical protein GCM10018771_12220 [Streptomyces cellulosae]
| 276 | 3.4e-31 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0769 | Seems to have no N-terminal signal seq.
|