| ID | SAVERM_4595
| Type | CDS
|
| From | 5609098
| nt length | 1200
|
| To | 5610297
| aa length | 399
|
| Gene |
| pI | 9.42
|
| Definition | putative serine protease
| M.W (Da) | 42065
|
| Note | PF00089: Trypsin
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3567 putative serine protease | 642 | 0.0e+00
|
| sgr | SGR_3330 putative serine protease | 653 | 0.0e+00
|
| sam | SAM23877_4095 putative colicin V biosynthesis protein | 656 | 0.0e+00
|
| scab | SCAB41281 putative serine protease | 696 | 0.0e+00
|
| sace | SACE_0334 putative membrane-associated serine protease | 258 | 1.0e-83
|
| nfar | nfa3510 protease | 276 | 2.3e-75
|
| mtub | gi|15610807 POSSIBLE MEMBRANE-ASSOCIATED SERINE PROTEASE [Mycobacterium tuberculosis H37Rv] | 247 | 8.6e-67
|
| cglu | gi|19551546 COG0265:Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Corynebacterium glutamicum] | 239 | 2.2e-64
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Trypsin_2 | 1 | Trypsin-like peptidase domain | 220-358 | 78.5 | 9.4e-22
|
| Colicin_V | 1 | Colicin V production protein | 4-144 | 68.8 | 4.3e-19
|
| Trypsin | 1 | Trypsin | 220-371 | 37.1 | 2.6e-09
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5097 | Seems to have a cleavable N-term signal seq.
|