| ID | SAVERM_4607
| Type | CDS
|
| From | 5626372
| nt length | 630
|
| To | 5627001
| aa length | 209
|
| Gene |
| pI | 7.69
|
| Definition | hypothetical protein
| M.W (Da) | 20750
|
| Note | PF00482: Bacterial type II secretion system protein F domain
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3555 putative integral membrane protein | 230 | 3.0e-76
|
| sgr | SGR_3319 hypothetical protein | 146 | 1.0e-43
|
| sam | SAM23877_4111 putative integral membrane protein | 209 | 1.0e-68
|
| scab | SCAB41151 hypothetical protein | 234 | 3.0e-78
|
| sace | SACE_0368 type II secretion system protein | 61 | 4.0e-12
|
| nfar | nfa3600 hypothetical protein | 96 | 1.8e-21
|
| mtub | gi|15610794 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 95 | 1.8e-21
|
| cglu | gi|19551552 conserved hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 75 | 1.3e-15
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| T2SSF | 1 | Type II secretion system (T2SS), protein F | 41-162 | 37.4 | 1.9e-09
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_058924083.1 | type II secretion system F family protein [Streptomyces sp. ...
| 392 | 1.2e-43 |
| WP_152792178.1 | type II secretion system F family protein, partial [Streptom...
| 384 | 1.1e-42 |
| WP_217459011.1 | type II secretion system F family protein [Streptomyces sp. ...
| 383 | 2.4e-42 |
|
| 383 | 2.8e-42 |
| WP_174267461.1 | type II secretion system F family protein [Streptomyces sp. ...
| 382 | 2.9e-42 |
| WP_055492044.1 | type II secretion system F family protein [Streptomyces sp. ...
| 382 | 3.5e-42 |
| ELS55137.1 | putative Integral membrane protein [Streptomyces viridochromogene...
| 378 | 4.0e-42 |
| WP_226027687.1 | type II secretion system F family protein [Streptomyces hyde...
| 377 | 4.1e-42 |
| WP_200307438.1 | type II secretion system F family protein [Streptomyces adel...
| 381 | 4.9e-42 |
| WP_193241656.1 | type II secretion system F family protein [Streptomyces phae...
| 381 | 6.0e-42 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3612 | Seems to have no N-terminal signal seq.
|