-- | --

IDSAVERM_4621 TypeCDS
From5640787 nt length2829
To5643615 aa length942
GenetopA pI9.11
Definitionputative DNA topoisomerase I M.W (Da)102620
NotePF01131: DNA topoisomerase AseI frg.L
SignalP v.4.0Non-secretory protein | plot CategoryDNA packaging & segregation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3543 probable DNA topoisomerase I16350.0e+00
sgrSGR_3301 putative DNA topoisomerase I16340.0e+00
samSAM23877_4123 DNA topoisomerase 116420.0e+00
scabSCAB40781 putative DNA topoisomerase I16680.0e+00
saceSACE_0377 DNA topoisomerase I11100.0e+00
nfarnfa3670 topA DNA topoisomerase I11610.0e+00
mtubgi|15610782 DNA topoisomerase I [Mycobacterium tuberculosis H37Rv]10430.0e+00
cglugi|19551559 COG0550:Topoisomerase IA [Corynebacterium glutamicum]10110.0e+00
bsubBG11007 topA, topI; DNA topoisomerase I [EC:5.99.1.2]4471.0e-126
ecoligi|16129235 DNA topoisomerase I [Escherichia coli K12]4401.8e-124
paerPA3011 [gene=topA] [prot=DNA topoisomerase I] [comment=PA3011]4233.2e-119

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Topoisom_bac1DNA topoisomerase149-591440.84.5e-132

Toprim_C_rpt4Topoisomerase C-terminal repeat640-691, 699-763, 769-819, 832-884213.91.3e-64

Toprim1Toprim domain14-13498.71.8e-28

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_148012336.1 type I DNA topoisomerase [Streptomyces sp. me109] >lcl 41240.0e+00
WP_164372883.1 type I DNA topoisomerase [Streptomyces sp. SID14446] >gb 41240.0e+00
WP_212727159.1 type I DNA topoisomerase [Streptomyces mirabilis] >gb 41230.0e+00
WP_168494169.1 type I DNA topoisomerase [Streptomyces sp. RLB1-33] >gb 41180.0e+00
WP_075032480.1 MULTISPECIES: type I DNA topoisomerase [Streptomyces] >gb 41130.0e+00
WP_217239800.1 type I DNA topoisomerase [Streptomyces sp. AC555_RSS877] 41120.0e+00
WP_081218544.1 type I DNA topoisomerase [Streptomyces sp. M41(2017)] >gb 41120.0e+00
WP_060901578.1 type I DNA topoisomerase [Streptomyces sp. WAC00263] >lcl 41100.0e+00
WP_097285653.1 type I DNA topoisomerase [Streptomyces sp. OK228] >emb 41080.0e+00
WP_143602474.1 MULTISPECIES: type I DNA topoisomerase [unclassified Strepto... 41070.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1489 Seems to have no N-terminal signal seq.