| ID | SAVERM_4622
| Type | CDS
|
| From | 5643834
| nt length | 3222
|
| To | 5647055
| aa length | 1073
|
| Gene | tmk
| pI | 5.47
|
| Definition | putative thymidylate kinase
| M.W (Da) | 113936
|
| Note | PF02223: Thymidylate kinase
| AseI frg. | L
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3542 integral membrane protein with kinase activity | 1257 | 0.0e+00
|
| sgr | SGR_3300 putative thymidylate kinase | 108 | 2.0e-24
|
| sam | SAM23877_4124 Integral membrane protein with kinase activity | 1192 | 0.0e+00
|
| scab | SCAB40761 putative thymidylate kinase | 1060 | 0.0e+00
|
| mtub | gi|15610383 thymidylate kinase [Mycobacterium tuberculosis H37Rv] | 60 | 4.5e-10
|
| bsub | BG10092 tmk, yaaP; thymidylate kinase [EC:2.7.4.9] | 142 | 1.4e-34
|
| ecoli | gi|16129061 thymidylate kinase [Escherichia coli K12] | 125 | 1.9e-29
|
| paer | PA2962 [gene=tmk] [prot=thymidylate kinase] [comment=PA2962] | 144 | 4.3e-35
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Thymidylate_kin | 1 | Thymidylate kinase | 514-699 | 156.7 | 4.7e-46
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5331 | Seems to have no N-terminal signal seq.
|