| ID | SAVERM_4641
| Type | CDS
|
| From | 5668528
| nt length | 306
|
| To | 5668223
| aa length | 101
|
| Gene | rpsN2
| pI | 12.22
|
| Definition | putative ribosomal protein S14
| M.W (Da) | 11709
|
| Note | PF00253: Ribosomal protein S14p/S29e
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3430 putative 30S ribosomal protein S14 | 166 | 6.0e-56
|
| sgr | SGR_544 putative 30S ribosomal protein S14 | 164 | 5.0e-55
|
| sam | SAM23877_4135 30S ribosomal protein S14 | 171 | 1.0e-57
|
| scab | SCAB40021 putative ribosomal protein S14 | 166 | 7.0e-56
|
| sace | SACE_0752 30S ribosomal protein S14 | 140 | 1.0e-45
|
| nfar | nfa49770 rpsN2 ribosomal protein S14 | 145 | 6.4e-37
|
| mtub | gi|15609193 30S ribosomal protein S14 [Mycobacterium tuberculosis H37Rv] | 134 | 1.5e-33
|
| cglu | gi|19552093 COG0199:Ribosomal protein S14 [Corynebacterium glutamicum] | 140 | 6.3e-36
|
| bsub | BG13085 yhzA; 30S ribosomal protein S14 | 82 | 4.4e-18
|
| ecoli | gi|16131186 30S ribosomal protein S14 [Escherichia coli K12] | 80 | 2.0e-17
|
| paer | PA4250 [gene=rpsN] [prot=30S ribosomal protein S14] [comment=PA4250] | 102 | 6.5e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_S14 | 1 | Ribosomal protein S14p/S29e | 48-100 | 77.0 | 6.4e-22
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_184909465.1 | MULTISPECIES: 30S ribosomal protein S14 [Streptomyces] >lcl
| 382 | 3.6e-46 |
| NEE13688.1 | 30S ribosomal protein S14 [Streptomyces sp. SID7499]
| 380 | 7.0e-46 |
| WP_138048780.1 | 30S ribosomal protein S14 [Streptomyces montanus] >lcl
| 378 | 1.4e-45 |
| WP_062928325.1 | MULTISPECIES: 30S ribosomal protein S14 [Streptomyces] >gb
| 377 | 1.6e-45 |
| WP_099967006.1 | 30S ribosomal protein S14 [Streptomyces sp. JV178] >gb
| 377 | 1.7e-45 |
| WP_142194002.1 | MULTISPECIES: 30S ribosomal protein S14 [Streptomyces] >lcl
| 377 | 1.7e-45 |
| WP_030846004.1 | 30S ribosomal protein S14 [Streptomyces sp. NRRL S-475]
| 377 | 1.8e-45 |
| WP_185012381.1 | MULTISPECIES: 30S ribosomal protein S14 [Streptomyces] >lcl
| 376 | 2.3e-45 |
| WP_102912337.1 | 30S ribosomal protein S14 [Streptomyces cahuitamycinicus] >g...
| 376 | 2.6e-45 |
| WP_053669725.1 | 30S ribosomal protein S14 [Streptomyces sp. NRRL B-1140] >gb...
| 376 | 2.8e-45 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4481 | Seems to have no N-terminal signal seq.
|