| ID | SAVERM_4645
| Type | CDS
|
| From | 5669258
| nt length | 1344
|
| To | 5670601
| aa length | 447
|
| Gene |
| pI | 4.76
|
| Definition | hypothetical protein
| M.W (Da) | 46683
|
| Note | PF07683: Cobalamin synthesis protein cobW C-terminal domain
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3426 hypothetical protein | 263 | 6.0e-85
|
| sgr | SGR_548 conserved hypothetical protein | 283 | 1.0e-92
|
| sam | SAM23877_4139 hypothetical protein | 296 | 1.0e-97
|
| scab | SCAB39981 hypothetical protein | 563 | 0.0e+00
|
| sace | SACE_0755 cobalamin synthesis CobW-like protein | 105 | 3.0e-25
|
| nfar | nfa49740 hypothetical protein | 101 | 1.5e-22
|
| mtub | gi|15607248 hypothetical protein Rv0106 [Mycobacterium tuberculosis H37Rv] | 108 | 5.5e-25
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CobW_C | 1 | Cobalamin synthesis protein cobW C-terminal domain | 306-421 | 71.1 | 5.1e-20
|
| cobW | 1 | CobW/HypB/UreG, nucleotide-binding domain | 67-193 | 29.3 | 5.1e-07
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1553 | Seems to have a cleavable N-term signal seq.
|