| ID | SAVERM_4646
| Type | CDS
|
| From | 5670601
| nt length | 237
|
| To | 5670837
| aa length | 78
|
| Gene | rpsR2
| pI | 12.04
|
| Definition | putative ribosomal protein S18
| M.W (Da) | 9080
|
| Note | PF01084: Ribosomal protein S18
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3425 putative 30S ribosomal protein S18 | 117 | 3.0e-37
|
| sgr | SGR_549 putative 30S ribosomal protein S18 | 107 | 4.0e-33
|
| sam | SAM23877_4140 30S ribosomal protein S18 2 | 106 | 7.0e-33
|
| scab | SCAB39971 putative ribosomal protein S18 | 125 | 1.0e-40
|
| sace | SACE_0751 30S ribosomal protein S18 | 91 | 6.0e-27
|
| nfar | nfa49780 rpsR2 ribosomal protein S18 | 94 | 1.4e-21
|
| mtub | gi|15609192 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Rv] | 87 | 1.6e-19
|
| cglu | gi|19552092 COG0238:Ribosomal protein S18 [Corynebacterium glutamicum] | 87 | 6.9e-20
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_S18 | 1 | Ribosomal protein S18 | 23-73 | 83.4 | 8.7e-24
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4473 | Seems to have no N-terminal signal seq.
|