| ID | SAVERM_4653
| Type | CDS
|
| From | 5676565
| nt length | 933
|
| To | 5677497
| aa length | 310
|
| Gene |
| pI | 9.5
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 33294
|
| Note | PF00005: ABC transporter
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3418 putative ABC transporter ATP-binding component | 485 | 3.0e-175
|
| sgr | SGR_4075 putative ABC transporter ATP-binding protein | 424 | 4.0e-151
|
| sam | SAM23877_4147 Daunorubicin/doxorubicin resistance ATP-binding protein DrrA | 472 | 3.0e-170
|
| scab | SCAB39901 putative ABC transporter ATP-binding protein | 457 | 6.0e-164
|
| sace | SACE_0424 probable ABC transporter, ATP-binding component | 324 | 9.0e-112
|
| nfar | nfa22860 ABC transporter ATP-binding protein | 360 | 8.7e-101
|
| mtub | gi|15610073 PROBABLE DAUNORUBICIN-DIM-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER DRRA [Mycobacterium tuberculosis H37Rv] | 267 | 5.9e-73
|
| ecoli | gi|49176047 putative ATP-binding component of a transport system [Escherichia coli K12] | 165 | 3.1e-42
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 20-163 | 97.5 | 8.2e-28
|
| AAA_21 | 1 | AAA domain, putative AbiEii toxin, Type IV TA system | 134-193 | 43.9 | 2.4e-11
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_164425107.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1126 | 8.5e-153 |
| WP_037900965.1 | MULTISPECIES: daunorubicin resistance protein DrrA family AB...
| 1120 | 7.5e-152 |
| WP_062051832.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1119 | 1.4e-151 |
| WP_095751075.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1119 | 1.5e-151 |
| WP_069764627.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1117 | 2.2e-151 |
| WP_030680013.1 | daunorubicin resistance protein DrrA family ABC transporter ...
| 1116 | 3.8e-151 |
| WP_059209238.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1115 | 4.1e-151 |
| WP_057612485.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1115 | 4.7e-151 |
| NUO44935.1 | ATP-binding cassette domain-containing protein [Streptomyces sp.]
| 1110 | 2.2e-150 |
| WP_053850654.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1109 | 3.7e-150 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2780 | Seems to have no N-terminal signal seq.
|