| ID | SAVERM_4676
| Type | CDS
|
| From | 5703649
| nt length | 1374
|
| To | 5702276
| aa length | 457
|
| Gene |
| pI | 11.03
|
| Definition | hypothetical protein
| M.W (Da) | 49509
|
| Note | PF03703: Bacterial membrane flanked domain
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3394 hypothetical protein | 637 | 0.0e+00
|
| sam | SAM23877_4169 Transmembrane protein | 661 | 0.0e+00
|
| scab | SCAB39681 hypothetical protein | 706 | 0.0e+00
|
| sace | SACE_1221 membrane-flanked domain protein | 68 | 4.0e-13
|
| nfar | nfa47540 membrane protein | 84 | 1.9e-17
|
| mtub | gi|15608366 PROBABLE TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 66 | 4.2e-12
|
| cglu | gi|19551872 COG3428:Predicted membrane protein [Corynebacterium glutamicum] | 107 | 1.2e-24
|
| bsub | BG12087 ydbT; hypothetical protein | 56 | 2.9e-09
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| bPH_2 | 3 | Bacterial PH domain | 88-165, 263-329, 356-430 | 143.4 | 1.7e-42
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_099504901.1 | MULTISPECIES: PH domain-containing protein [Streptomyces] >g...
| 1501 | 0.0e+00 |
| WP_054237489.1 | MULTISPECIES: PH domain-containing protein [unclassified Str...
| 1468 | 0.0e+00 |
| WP_181650482.1 | PH domain-containing protein [Streptomyces sp. WAC00263] >lc...
| 1467 | 0.0e+00 |
| WP_097285694.1 | MULTISPECIES: PH domain-containing protein [unclassified Str...
| 1467 | 0.0e+00 |
| WP_099921337.1 | MULTISPECIES: PH domain-containing protein [Streptomyces] >d...
| 1466 | 0.0e+00 |
| WP_095853301.1 | MULTISPECIES: PH domain-containing protein [unclassified Str...
| 1465 | 0.0e+00 |
| WP_075032441.1 | PH domain-containing protein [Streptomyces mirabilis] >emb
| 1462 | 0.0e+00 |
| WP_067373694.1 | PH domain-containing protein [Streptomyces olivochromogenes]...
| 1456 | 0.0e+00 |
| WP_211180004.1 | PH domain-containing protein [Streptomyces sp. RLA2-12]
| 1455 | 0.0e+00 |
| WP_168501208.1 | MULTISPECIES: PH domain-containing protein [Streptomyces] >g...
| 1452 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2911 | Seems to have no N-terminal signal seq.
|