| ID | SAVERM_4695
| Type | CDS
|
| From | 5720536
| nt length | 336
|
| To | 5720871
| aa length | 111
|
| Gene |
| pI | 6.89
|
| Definition | putative Lsr2-like protein
| M.W (Da) | 11828
|
| Note | PF11774: Lsr2
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3375 putative Lsr2-like protein | 206 | 1.0e-71
|
| sgr | SGR_4116 putative Lsr2-like protein | 192 | 5.0e-66
|
| sam | SAM23877_4189 Nucleoid-associated protein Lsr2 | 209 | 2.0e-72
|
| scab | SCAB39511 putative Lsr2-like protein | 170 | 5.0e-57
|
| sace | SACE_0410 probable iron-regulated LSR2 protein precursor | 112 | 2.0e-34
|
| nfar | nfa24160 LSR2 protein | 107 | 2.3e-25
|
| mtub | gi|15610733 PROBABLE IRON-REGULATED LSR2 PROTEIN PRECURSOR [Mycobacterium tuberculosis H37Rv] | 113 | 2.6e-27
|
| cglu | gi|19552950 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 34 | 1.5e-03
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Lsr2 | 1 | Lsr2 | 1-109 | 141.3 | 1.1e-41
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2513 | Seems to have no N-terminal signal seq.
|