-- | --

IDSAVERM_4696 TypeCDS
From5721551 nt length702
To5720850 aa length233
Gene pI6.35
Definitionputative proline-rich protein M.W (Da)23828
NotePF01391: Collagen triple helix repeat (20 copies) AseI frg.R
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3374 hypothetical proline-rich protein1902.0e-61
sgrSGR_4117 hypothetical proline-rich protein1676.0e-53
samSAM23877_4190 hypothetical protein2022.0e-65
scabSCAB39501 putative proline-rich protein2303.0e-77

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_103842142.1 SCO3374 family protein [Streptomyces sp. Ru72] >gb 6808.6e-88
WP_200422412.1 SCO3374 family protein [Streptomyces sp. Y2F8-2] 6763.6e-87
GHK04464.1 hypothetical protein SY2F82_62610 [Streptomyces sp. Y2F8-2] 6743.8e-87
WP_055491974.1 SCO3374 family protein [Streptomyces sp. TP-A0356] 6661.1e-85
WP_189880293.1 SCO3374 family protein [Streptomyces bluensis] 6572.6e-84
WP_224739004.1 SCO3374 family protein [Streptomyces sp. PSKA30] >lcl 6471.2e-82
WP_234512002.1 SCO3374 family protein [Streptomyces glomeratus] >lcl 6433.0e-82
WP_152776898.1 SCO3374 family protein [Streptomyces spongiae] >gb 6392.0e-81
WP_063746327.1 SCO3374 family protein [Streptomyces prunicolor] 6331.4e-80
WP_129799480.1 SCO3374 family protein [Streptomyces sp. F001] >gb 6304.6e-80

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4104 Seems to have no N-terminal signal seq.