| ID | SAVERM_4714
| Type | CDS
|
| From | 5745258
| nt length | 810
|
| To | 5746067
| aa length | 269
|
| Gene |
| pI | 7.37
|
| Definition | hypothetical protein
| M.W (Da) | 30493
|
| Note | PF01261: AP endonuclease family 2
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3347 hypothetical protein | 498 | 0.0e+00
|
| sgr | SGR_4133 conserved hypothetical protein | 507 | 0.0e+00
|
| sam | SAM23877_4214 hypothetical protein | 498 | 0.0e+00
|
| scab | SCAB39311 hypothetical protein | 516 | 0.0e+00
|
| sace | SACE_6962 xylose isomerase-like TIM barrel | 261 | 1.0e-88
|
| nfar | nfa51790 hypothetical protein | 271 | 5.7e-74
|
| mtub | gi|15607639 hypothetical protein Rv0498 [Mycobacterium tuberculosis H37Rv] | 285 | 3.0e-78
|
| ecoli | gi|49176341 putative fructoselysine or fructoselysine 6-P isomerase [Escherichia coli K12] | 52 | 3.2e-08
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AP_endonuc_2 | 1 | Xylose isomerase-like TIM barrel | 24-211 | 68.2 | 6.2e-19
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498305.1 | sugar phosphate isomerase/epimerase [Streptomyces sp. SID546...
| 1353 | 0.0e+00 |
| GHD59737.1 | hypothetical protein GCM10010317_050700 [Streptomyces mirabilis]
| 1321 | 0.0e+00 |
| WP_054228683.1 | MULTISPECIES: sugar phosphate isomerase/epimerase [unclassif...
| 1320 | 0.0e+00 |
| WP_211180009.1 | sugar phosphate isomerase/epimerase [Streptomyces sp. RLA2-1...
| 1320 | 0.0e+00 |
| WP_026151680.1 | sugar phosphate isomerase/epimerase [Streptomyces prunicolor...
| 1319 | 0.0e+00 |
| WP_046581676.1 | sugar phosphate isomerase/epimerase [Streptomyces mangroviso...
| 1319 | 0.0e+00 |
| WP_043687963.1 | sugar phosphate isomerase/epimerase [Streptomyces xylophagus...
| 1318 | 0.0e+00 |
| PBC97136.1 | sugar phosphate isomerase/epimerase [Streptomyces sp. Ag82_O1-15]
| 1317 | 0.0e+00 |
| WP_075032411.1 | MULTISPECIES: sugar phosphate isomerase/epimerase [Streptomy...
| 1317 | 0.0e+00 |
| M... |
| 1316 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0774 | Seems to have no N-terminal signal seq.
|