| ID | SAVERM_4722
| Type | CDS
|
| From | 5754929
| nt length | 828
|
| To | 5755756
| aa length | 275
|
| Gene |
| pI | 8.25
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 28992
|
| Note | PF00005: ABC transporter
| AseI frg. | R
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3339 putative ABC transporter ATP-binding subunit | 414 | 4.0e-148
|
| sgr | SGR_4139 putative ABC transporter ATP-binding protein | 365 | 3.0e-129
|
| sam | SAM23877_4221 ABC transporter ATP-binding protein | 416 | 3.0e-149
|
| scab | SCAB39241 putative ABC transporter ATP-binding protein | 377 | 3.0e-134
|
| nfar | nfa19890 ABC transporter ATP-binding protein | 262 | 2.1e-71
|
| mtub | gi|15608825 PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 231 | 5.2e-62
|
| cglu | gi|19552670 COG1131:ABC-type multidrug transport system, ATPase component [Corynebacterium glutamicum] | 199 | 1.2e-52
|
| ecoli | gi|49176363 ribosome-associated ATPase, ATP-binding domain (N-terminal) [Escherichia coli K12] | 168 | 4.1e-43
|
| paer | PA5231 [gene=PA5231] [prot=probable ATP-binding/permease fusion ABC transporter] [comment=PA5231] | 186 | 2.0e-48
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 36-180 | 102.8 | 1.9e-29
|
| AAA_21 | 1 | AAA domain, putative AbiEii toxin, Type IV TA system | 150-211 | 46.0 | 5.7e-12
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_168529389.1 | ABC transporter ATP-binding protein [Streptomyces sp. RPA4-2...
| 1101 | 6.5e-150 |
| WP_168494300.1 | ABC transporter ATP-binding protein [Streptomyces sp. RLB1-3...
| 1091 | 9.2e-149 |
| WP_060896521.1 | ABC transporter ATP-binding protein [Streptomyces sp. WAC002...
| 1090 | 2.4e-148 |
| WP_153289263.1 | ABC transporter ATP-binding protein [Streptomyces fagopyri] ...
| 1089 | 2.6e-148 |
| WP_200397504.1 | ABC transporter ATP-binding protein [Streptomyces sp. ZYC-3]...
| 1088 | 3.4e-148 |
| WP_165345653.1 | ABC transporter ATP-binding protein [Streptomyces ureilyticu...
| 1088 | 4.1e-148 |
| QIY97496.1 | ABC transporter ATP-binding protein [Streptomyces sp. S1D4-11]
| 1088 | 4.9e-148 |
| WP_143640474.1 | ABC transporter ATP-binding protein [Streptomyces sp. IB2016...
| 1086 | 5.4e-148 |
| WP_212727142.1 | ABC transporter ATP-binding protein [Streptomyces mirabilis]...
| 1083 | 1.7e-147 |
| WP_190230663.1 | ABC transporter ATP-binding protein [Streptomyces umbrinus] ...
| 1083 | 2.1e-147 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1341 | Seems to have no N-terminal signal seq.
|