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IDSAVERM_4776 TypeCDS
From5821553 nt length204
To5821756 aa length67
GenecspD5 pI4.54
Definitionputative cold shock protein M.W (Da)7220
NotePF00313: 'Cold-shock' DNA-binding domain AseI frg.I
SignalP v.4.0Non-secretory protein | plot Categoryadaptation to atypical conditions


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65107.81.7e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_010986199.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3441.8e-41
WP_019063123.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3433.0e-41
WP_009717734.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3423.6e-41
WP_009715709.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3414.3e-41
WP_030365760.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3414.5e-41
WP_069779708.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3414.6e-41
WP_037915390.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3414.6e-41
WP_197987712.1 cold-shock protein [Streptomyces pactum] >lcl 3415.6e-41
GDY53843.1 cold-shock protein [Streptomyces violaceusniger] 3416.1e-41
WP_030898965.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3407.8e-41

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2929 Seems to have no N-terminal signal seq.