| ID | SAVERM_4798
| Type | CDS
|
| From | 5838736
| nt length | 633
|
| To | 5839368
| aa length | 210
|
| Gene | resA
| pI | 10.09
|
| Definition | putative cytochrome c biogenesis protein
| M.W (Da) | 22164
|
| Note | PF08534: Redoxin
| AseI frg. | I
|
| SignalP v.4.0 | Signal peptide | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4472 putative secreted protein | 258 | 1.0e-88
|
| sgr | SGR_4196 conserved hypothetical protein | 249 | 2.0e-85
|
| sam | SAM23877_4290 Secreted protein | 268 | 2.0e-92
|
| scab | SCAB38661 putative cytochrome c biogenesis protein | 264 | 1.0e-91
|
| sace | SACE_6933 thiol-disulfide isomerase/thioredoxin | 124 | 1.0e-36
|
| nfar | nfa51580 cytochrome c biogenesis protein | 125 | 2.7e-30
|
| mtub | gi|15607666 POSSIBLE THIOREDOXIN PROTEIN (THIOL-DISULFIDE INTERCHANGE PROTEIN) [Mycobacterium tuberculosis H37Rv] | 116 | 9.8e-28
|
| cglu | gi|19551684 COG0526:Thiol-disulfide isomerase and thioredoxins [Corynebacterium glutamicum] | 95 | 2.2e-21
|
| bsub | BG10531 resA, ypxA; cytochrome c biogenesis protein, similar to thioredoxin | 79 | 1.5e-16
|
| ecoli | gi|16130132 heme lyase/disulfide oxidoreductase (thiol:disulfide interchange protein) [Escherichia coli K12] | 59 | 1.4e-10
|
| paer | PA1481 [gene=ccmG] [prot=cytochrome C biogenesis protein CcmG] [comment=PA1481] | 72 | 3.7e-14
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AhpC-TSA | 1 | AhpC/TSA family | 69-188 | 93.9 | 6.2e-27
|
| Redoxin | 1 | Redoxin | 70-195 | 87.2 | 7.5e-25
|
| Thioredoxin_8 | 1 | Thioredoxin-like | 90-186 | 32.9 | 5.8e-08
|
| Thioredoxin | 1 | Thioredoxin | 89-132 | 27.2 | 2.6e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_153289217.1 | TlpA family protein disulfide reductase [Streptomyces fagopy...
| 791 | 3.8e-105 |
| WP_168529461.1 | TlpA family protein disulfide reductase [Streptomyces sp. RP...
| 784 | 4.3e-104 |
| WP_148009923.1 | TlpA family protein disulfide reductase [Streptomyces sp. me...
| 779 | 2.5e-103 |
| WP_181650426.1 | TlpA family protein disulfide reductase [Streptomyces sp. WA...
| 778 | 3.8e-103 |
| WP_075028623.1 | MULTISPECIES: TlpA family protein disulfide reductase [Strep...
| 774 | 1.8e-102 |
| WP_095853217.1 | MULTISPECIES: TlpA family protein disulfide reductase [uncla...
| 773 | 2.0e-102 |
| WP_067367610.1 | TlpA family protein disulfide reductase [Streptomyces olivoc...
| 773 | 2.4e-102 |
| WP_168494434.1 | MULTISPECIES: TlpA family protein disulfide reductase [Strep...
| 773 | 2.6e-102 |
| WP_097285763.1 | MULTISPECIES: TlpA family protein disulfide reductase [uncla...
| 771 | 4.7e-102 |
| QIY97552.1 | TlpA family protein disulfide reductase [Streptomyces sp. S1D4-11...
| 770 | 7.2e-102 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3081 | Seems to have no N-terminal signal seq.
|