| ID | SAVERM_4809
| Type | CDS
|
| From | 5850173
| nt length | 1452
|
| To | 5851624
| aa length | 483
|
| Gene | ubiX
| pI | 6.47
|
| Definition | putative decarboxylase
| M.W (Da) | 53824
|
| Note | PF01977: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4490 conserved hypothetical protein | 934 | 0.0e+00
|
| sgr | SGR_4201 putative decarboxylase | 934 | 0.0e+00
|
| sam | SAM23877_4304 hypothetical protein | 942 | 0.0e+00
|
| scab | SCAB38401 putative decarboxylase | 937 | 0.0e+00
|
| sace | SACE_2087 putative 3-polyprenyl-4-hydroxybenzoate decarboxylase | 183 | 4.0e-53
|
| bsub | BG12024 yclC; similar to vanillic acid non-oxidative decarboxylation gene | 172 | 3.9e-44
|
| ecoli | gi|16131689 3-octaprenyl-4-hydroxybenzoate decarboxylase [Escherichia coli K12] | 376 | 1.5e-105
|
| paer | PA5237 [gene=PA5237] [prot=conserved hypothetical protein] [comment=PA5237] | 358 | 6.0e-100
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UbiD | 1 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | 10-423 | 528.2 | 1.2e-158
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189190730.1 | menaquinone biosynthesis decarboxylase [Streptomyces albifla...
| 2511 | 0.0e+00 |
| WP_095935877.1 | menaquinone biosynthesis decarboxylase [Streptomyces sp. Tue...
| 2510 | 0.0e+00 |
| WP_028805061.1 | menaquinone biosynthesis decarboxylase [Streptomyces sp. 142...
| 2506 | 0.0e+00 |
| WP_138051165.1 | menaquinone biosynthesis decarboxylase [Streptomyces montanu...
| 2501 | 0.0e+00 |
| WP_123966844.1 | menaquinone biosynthesis decarboxylase [Streptomyces sp. TLI...
| 2501 | 0.0e+00 |
| WP_030945420.1 | menaquinone biosynthesis decarboxylase [Streptomyces sp. NRR...
| 2499 | 0.0e+00 |
| WP_168529482.1 | menaquinone biosynthesis decarboxylase [Streptomyces sp. RPA...
| 2498 | 0.0e+00 |
| WP_148009931.1 | menaquinone biosynthesis decarboxylase [Streptomyces sp. me1...
| 2496 | 0.0e+00 |
| WP_217455685.1 | menaquinone biosynthesis decarboxylase [Streptomyces sp. BV2...
| 2495 | 0.0e+00 |
| WP_153289209.1 | menaquinone biosynthesis decarboxylase [Streptomyces fagopyr...
| 2495 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3885 | Seems to have no N-terminal signal seq.
|