| ID | SAVERM_4837
| Type | CDS
|
| From | 5880403
| nt length | 360
|
| To | 5880762
| aa length | 119
|
| Gene | nuoA1
| pI | 4.96
|
| Definition | putative NADH dehydrogenase I chain A (complex I)
| M.W (Da) | 13227
|
| Note | PF00507: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4562 nuoA NADH dehydrogenase subunit | 235 | 1.0e-82
|
| sgr | SGR_2984 putative NADH dehydrogenase chain A | 234 | 2.0e-82
|
| sam | SAM23877_4383 NADH-quinone oxidoreductase subunit A | 235 | 1.0e-82
|
| scab | SCAB38091 putative NADH dehydrogenase I chain A (complex I) | 234 | 2.0e-82
|
| sace | SACE_6902 NADH dehydrogenase I chain A | 169 | 2.0e-56
|
| nfar | nfa26670 nuoA NADH dehydrogenase I chain A | 188 | 1.2e-49
|
| mtub | gi|15610281 NADH dehydrogenase alpha subunit [Mycobacterium tuberculosis H37Rv] | 184 | 1.4e-48
|
| ecoli | gi|49176207 NADH dehydrogenase alpha subunit [Escherichia coli K12] | 61 | 1.8e-11
|
| paer | PA2637 [gene=nuoA] [prot=NADH dehydrogenase I chain A] [comment=PA2637] | 86 | 5.2e-19
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Oxidored_q4 | 1 | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 | 19-118 | 124.0 | 2e-36
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_007383963.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit A [Strepto...
| 602 | 3.8e-79 |
| WP_030790196.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit A [Strepto...
| 600 | 6.2e-79 |
| WP_003992243.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit A [Strepto...
| 600 | 6.2e-79 |
| WP_033319564.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit A [Strepto...
| 600 | 6.2e-79 |
| WP_009310323.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit A [Strepto...
| 600 | 6.2e-79 |
| WP_003974383.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit A [Strepto...
| 599 | 8.9e-79 |
| WP_100569667.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit A [Strepto...
| 599 | 9.0e-79 |
|
| 599 | 9.9e-79 |
| WP_077799000.1 | NADH-quinone oxidoreductase subunit A [Streptomyces sp. JHA2...
| 599 | 9.9e-79 |
| WP_114053663.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit A [Strepto...
| 599 | 9.9e-79 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4567 | Seems to have an uncleavable N-term signal seq
|