| ID | SAVERM_4841
| Type | CDS
|
| From | 5883400
| nt length | 864
|
| To | 5884263
| aa length | 287
|
| Gene | nuoE
| pI | 4.46
|
| Definition | putative NADH dehydrogenase I chain E (complex I)
| M.W (Da) | 30387
|
| Note | PF01257: Respiratory-chain NADH dehydrogenase 24 Kd subunit
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4566 nuoE NADH dehydrogenase subunit | 489 | 1.0e-177
|
| sgr | SGR_2980 putative NADH dehydrogenase chain E | 458 | 2.0e-165
|
| sam | SAM23877_4387 NADH-ubiquinone oxidoreductase chain E | 481 | 3.0e-174
|
| scab | SCAB38051 putative NADH dehydrogenase I chain E (complex I) | 505 | 0.0e+00
|
| sace | SACE_6898 putative NADH dehydrogenase chain E | 227 | 4.0e-75
|
| nfar | nfa26630 nuoE NADH dehydrogenase I chain E | 313 | 8.5e-87
|
| mtub | gi|15610285 ATP synthase subunit E [Mycobacterium tuberculosis H37Rv] | 299 | 1.3e-82
|
| ecoli | gi|16130220 ATP synthase subunit E [Escherichia coli K12] | 79 | 2.0e-16
|
| paer | PA2640 [gene=nuoE] [prot=NADH dehydrogenase I chain E] [comment=PA2640] | 86 | 2.3e-18
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| 2Fe-2S_thioredx | 1 | Thioredoxin-like [2Fe-2S] ferredoxin | 36-177 | 169.3 | 4.2e-50
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498329.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces sp. S...
| 1440 | 0.0e+00 |
| WP_128381821.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces caver...
| 1398 | 0.0e+00 |
| WP_224733307.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces sp. P...
| 1358 | 0.0e+00 |
| WP_086600445.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces swart...
| 1358 | 0.0e+00 |
| WP_109377486.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces sp. N...
| 1355 | 0.0e+00 |
| WP_095749656.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces sp. S...
| 1355 | 0.0e+00 |
| WP_193474704.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces grise...
| 1354 | 0.0e+00 |
| WP_086562799.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces afric...
| 1353 | 0.0e+00 |
| WP_184760929.1 | NADH-quinone oxidoreductase subunit NuoE [Streptomyces albad...
| 1353 | 0.0e+00 |
| WP_019524486.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoE [uncl...
| 1352 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2322 | Seems to have no N-terminal signal seq.
|