| ID | SAVERM_4847
| Type | CDS
|
| From | 5890902
| nt length | 300
|
| To | 5891201
| aa length | 99
|
| Gene | nuoK1
| pI | 8.24
|
| Definition | putative NADH dehydrogenase I chain K (complex I)
| M.W (Da) | 10704
|
| Note | PF00420: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4572 nuoN NADH dehydrogenase subunit | 176 | 4.0e-60
|
| sgr | SGR_2974 putative NADH dehydrogenase chain K | 169 | 5.0e-57
|
| sam | SAM23877_4393 NADH:ubiquinone oxidoreductase, membrane subunit K | 176 | 4.0e-60
|
| scab | SCAB37991 putative NADH dehydrogenase I chain K (complex I) | 174 | 7.0e-59
|
| sace | SACE_6892 NADH dehydrogenase I chain K | 128 | 4.0e-41
|
| nfar | nfa26580 nuoK NADH dehydrogenase I chain K | 158 | 5.6e-41
|
| mtub | gi|15610291 NADH dehydrogenase kappa subunit [Mycobacterium tuberculosis H37Rv] | 156 | 2.1e-40
|
| ecoli | gi|16130214 NADH dehydrogenase kappa subunit [Escherichia coli K12] | 78 | 1.0e-16
|
| paer | PA2646 [gene=nuoK] [prot=NADH dehydrogenase I chain K] [comment=PA2646] | 79 | 3.5e-17
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Oxidored_q2 | 1 | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | 6-93 | 83.6 | 6e-24
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_030420551.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoK [uncl...
| 411 | 9.5e-51 |
| WP_004927567.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoK [Stre...
| 411 | 1.2e-50 |
| MYU23809.1 | NADH-quinone oxidoreductase subunit NuoK [Streptomyces sp. SID835...
| 410 | 1.6e-50 |
| WP_075779414.1 | NADH-quinone oxidoreductase subunit NuoK [Streptomyces acidi...
| 410 | 1.7e-50 |
| WP_003974374.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoK [Stre...
| 410 | 1.7e-50 |
| NKI45046.1 | NADH-quinone oxidoreductase subunit NuoK [Streptomyces physcomitr...
| 409 | 2.1e-50 |
| WP_030401737.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoK [Stre...
| 409 | 2.2e-50 |
| WP_037929353.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoK [Stre...
| 409 | 2.2e-50 |
| WP_030778338.1 | MULTISPECIES: NADH-quinone oxidoreductase subunit NuoK [Stre...
| 408 | 2.5e-50 |
| MYR42953.1 | NADH-quinone oxidoreductase subunit NuoK [Streptomyces sp. SID591...
| 408 | 2.5e-50 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4694 | Seems to have a cleavable N-term signal seq.
|