| ID | SAVERM_4867
| Type | CDS
|
| From | 5918301
| nt length | 1041
|
| To | 5919341
| aa length | 346
|
| Gene |
| pI | 4.83
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 35892
|
| Note | PF00005: ABC transporter
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4585 putative ABC transporter ATP-binding protein | 530 | 0.0e+00
|
| sgr | SGR_2962 putative ABC transporter ATP-binding protein | 442 | 5.0e-157
|
| sam | SAM23877_4420 putative ABC transporter ATP-binding protein | 534 | 0.0e+00
|
| scab | SCAB37801 putative ABC transporter ATP-binding protein | 498 | 8.0e-180
|
| sace | SACE_0995 putative ABC transporter ATP-binding protein | 278 | 3.0e-93
|
| nfar | nfa4200 ABC transporter ATP-binding protein | 234 | 1.1e-62
|
| bsub | BG11586 yhcH; ABC-2 type transport system ATP-binding protein | 190 | 9.3e-50
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 58-202 | 88.4 | 5.4e-25
|
| AAA_21 | 1 | AAA domain, putative AbiEii toxin, Type IV TA system | 175-231 | 54.9 | 1e-14
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| MYT00450.1 | ATP-binding cassette domain-containing protein [Streptomyces sp. ...
| 1248 | 8.6e-171 |
| WP_107459179.1 | ABC transporter ATP-binding protein [Streptomyces colonosana...
| 1219 | 4.6e-166 |
| OIK00156.1 | multidrug ABC transporter ATP-binding protein [Streptomyces colon...
| 1216 | 8.9e-166 |
| WP_189315758.1 | ABC transporter ATP-binding protein [Streptomyces brasiliens...
| 1198 | 7.4e-163 |
| WP_016437661.1 | ABC transporter ATP-binding protein [Streptomyces sp. HGB002...
| 1183 | 9.4e-161 |
| WP_235456117.1 | ABC transporter ATP-binding protein [Streptomyces olivochrom...
| 1182 | 1.6e-160 |
| WP_208782949.1 | ABC transporter ATP-binding protein [Streptomyces griseorubi...
| 1181 | 2.3e-160 |
| WP_107467877.1 | ABC transporter ATP-binding protein [Streptomyces sp. MA5143...
| 1182 | 4.9e-160 |
| WP_055539935.1 | ABC transporter ATP-binding protein [Streptomyces neyagawaen...
| 1178 | 5.4e-160 |
|
| 1176 | 7.4e-160 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.6312 | Seems to have no N-terminal signal seq.
|