| ID | SAVERM_4873
| Type | CDS
|
| From | 5925895
| nt length | 981
|
| To | 5924915
| aa length | 326
|
| Gene |
| pI | 10.18
|
| Definition | hypothetical protein
| M.W (Da) | 35005
|
| Note | PF00892: Integral membrane protein DUF6
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4592 putative integral membrane protein | 493 | 2.0e-177
|
| sgr | SGR_2933 putative integral membrane protein | 438 | 8.0e-156
|
| sam | SAM23877_4427 Protein RarD | 491 | 8.0e-177
|
| scab | SCAB37601 hypothetical protein | 466 | 2.0e-167
|
| nfar | nfa17830 membrane protein | 268 | 6.2e-73
|
| mtub | gi|15608646 Probable membrane protein [Mycobacterium tuberculosis H37Rv] | 42 | 4.3e-05
|
| cglu | gi|19553330 COG2962:Predicted permeases [Corynebacterium glutamicum] | 235 | 2.4e-63
|
| bsub | BG13557 yojE; similar to hypothetical proteins | 221 | 5.9e-59
|
| ecoli | gi|49176418 chloramphenicol resistance [Escherichia coli K12] | 230 | 1.1e-61
|
| paer | PA0485 [gene=PA0485] [prot=conserved hypothetical protein] [comment=PA0485] | 238 | 4.3e-64
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| EamA | 2 | EamA-like transporter family | 16-151, 161-292 | 63.5 | 2e-17
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2911 | Seems to have no N-terminal signal seq.
|