| ID | SAVERM_4908
| Type | CDS
|
| From | 5964712
| nt length | 288
|
| To | 5964999
| aa length | 95
|
| Gene | secE
| pI | 10.6
|
| Definition | putative preprotein translocase SecE subunit
| M.W (Da) | 10623
|
| Note | PF00584: SecE/Sec61-gamma subunits of protein translocation complex
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein secretion
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4646 secE preprotein translocase SecE subunit | 128 | 6.0e-41
|
| sgr | SGR_2876 "putative preprotein translocase, SecE" | 119 | 2.0e-37
|
| sam | SAM23877_4465 Protein translocase subunit SecE | 159 | 4.0e-53
|
| scab | SCAB37261 putative preprotein translocase SecE subunit | 128 | 6.0e-41
|
| nfar | nfa51170 secE preprotein translocase | 82 | 6.8e-18
|
| mtub | gi|57116765 translocase [Mycobacterium tuberculosis H37Rv] | 65 | 5.0e-13
|
| cglu | gi|19551717 COG0690:Preprotein translocase subunit SecE [Corynebacterium glutamicum] | 52 | 3.0e-09
|
| bsub | BG10161 secE; preprotein translocase SecE subunit | 41 | 5.2e-06
|
| ecoli | gi|16131811 translocase [Escherichia coli K12] | 35 | 7.3e-04
|
| paer | PA4276 [gene=secE] [prot=secretion protein SecE] [comment=PA4276] | 39 | 4.0e-05
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| SecE | 1 | SecE/Sec61-gamma subunits of protein translocation complex | 42-89 | 68.8 | 2.6e-19
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| NUT25163.1 | preprotein translocase subunit SecE [Streptomyces sp.]
| 261 | 6.7e-28 |
| WP_067019035.1 | preprotein translocase subunit SecE [Streptomyces dysideae] ...
| 260 | 9.0e-28 |
| WP_189287516.1 | preprotein translocase subunit SecE [Streptomyces fumigatisc...
| 259 | 1.0e-27 |
|
| 259 | 1.2e-27 |
| WP_190189423.1 | preprotein translocase subunit SecE [Streptomyces minutiscle...
| 259 | 1.3e-27 |
| WP_128433103.1 | preprotein translocase subunit SecE [Streptomyces cyaneus]
| 258 | 1.4e-27 |
| WP_158727387.1 | preprotein translocase subunit SecE [Streptomyces sp. NRRL S...
| 258 | 2.1e-27 |
| WP_201832349.1 | preprotein translocase subunit SecE [Streptomyces actinomyci...
| 256 | 2.8e-27 |
| WP_095748120.1 | preprotein translocase subunit SecE [Streptomyces sp. SA15] ...
| 256 | 3.1e-27 |
| WP_062706824.1 | MULTISPECIES: preprotein translocase subunit SecE [Streptomy...
| 256 | 3.1e-27 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.7241 | Seems to have no N-terminal signal seq.
|