| ID | SAVERM_4939
| Type | CDS
|
| From | 5993877
| nt length | 186
|
| To | 5994062
| aa length | 61
|
| Gene | rpsN1
| pI | 11.6
|
| Definition | putative ribosomal protein S14
| M.W (Da) | 6949
|
| Note | PF00253: Ribosomal protein S14p/S29e
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4715 30S ribosomal protein S14 | 125 | 5.0e-41
|
| sgr | SGR_2821 30S ribosomal protein S14 | 125 | 4.0e-41
|
| sam | SAM23877_4511 30S ribosomal protein S14 type Z | 126 | 3.0e-41
|
| scab | SCAB36811 putative ribosomal protein S14 | 125 | 5.0e-41
|
| sace | SACE_6823 30S ribosomal protein S14 | 110 | 7.0e-35
|
| nfar | nfa7770 rpsN ribosomal protein S14 | 117 | 2.2e-28
|
| mtub | gi|57116769 30S ribosomal protein S14 [Mycobacterium tuberculosis H37Rv] | 109 | 4.0e-26
|
| bsub | BG10761 rpsN; 30S ribosomal protein S14 | 97 | 9.1e-23
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_S14 | 1 | Ribosomal protein S14p/S29e | 9-60 | 85.5 | 1.4e-24
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_206313581.1 | type Z 30S ribosomal protein S14 [Streptomyces coryli]
| 246 | 1.3e-26 |
| WP_203599683.1 | type Z 30S ribosomal protein S14 [Streptomyces sp. SID10853]
| 246 | 1.3e-26 |
| NGN63817.1 | type Z 30S ribosomal protein S14 [Streptomyces coryli]
| 245 | 1.5e-26 |
| WP_024491590.1 | MULTISPECIES: type Z 30S ribosomal protein S14 [Streptomyces...
| 245 | 1.7e-26 |
| WP_037575347.1 | MULTISPECIES: type Z 30S ribosomal protein S14 [Streptacidip...
| 245 | 1.8e-26 |
| WP_030251570.1 | MULTISPECIES: type Z 30S ribosomal protein S14 [Streptomycet...
| 244 | 1.9e-26 |
| WP_196193109.1 | type Z 30S ribosomal protein S14 [Streptacidiphilus fuscans]...
| 244 | 1.9e-26 |
| WP_052530793.1 | type Z 30S ribosomal protein S14 [Kineosporia mesophila] >lc...
| 244 | 2.0e-26 |
| WP_055585129.1 | MULTISPECIES: type Z 30S ribosomal protein S14 [Streptacidip...
| 244 | 2.1e-26 |
| WP_020869254.1 | type Z 30S ribosomal protein S14 [Streptomyces rapamycinicus...
| 244 | 2.2e-26 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4664 | Seems to have no N-terminal signal seq.
|